Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00091 ATGGGTCCGTTTGATTCTCGTAATCACCGTCATCGTCTTCAACACGAAGAAGAAGAAGCCATTTCAGATCTGCATTACCAAGCATCCCGGAGGCTGGCCGCGTCGTCTCCGAACGCTGCCCACATCCGTCACCTGCTCCTCCGATGCGCGCAGCTTATCACTCAAGCGGACTTCTCCGCCGCTCACCGTCTCATCTCCATTCTATCCTCTTACGCCTCCCCCTGCGGGGACTCCACCGAGAGACTGGTCCACCAGCTCTCCAAAGCCCTTTCTCACCGCCTGGCTGCCTCATCTCCGACCGTGGACGCCGCCGCCTCTGCTTCGATGCTGATGCTGATGACAATGGGCGAGGTTGTCCCTTCTACCAATTTCGGTGATGAGAATGCTTACCCGGTTGAGTTCTCATCCCCATTCTCCGACGAGGCAATTCATTCCTGCTATTTATCGCTAAATCAAATCACTCCATTCATAAGATTCAGCCATTTAACAGCAAACCAAGCGATTTTAGAAGCAATTGGGGAAGAACAAAGAGCAATCCACATTCTGGATTTTGAAATAATGCATGGAGTTCAATGGCCCCCTCTCATGCAAGCCTTAGTCGAACGTTCTAAATTCTACCCGCCGCCGATGTTAAGAATCACTGGCACCGGCCGCGACCTCAACTTCCTCTGCAAAACTGGCGATCGTCTCTCTATTTTCGCTCAATCTCTTGGTCTCCGGTTTCAGTTTCAACCGCTTCTCATTCTTAACGATCACGACCACAATCGTCTCATTCCTTCAGCTCTCACGCTAAACCCTAACGAAGCTTTAGCCGTCAACTGTGTTTTCTATCTCCACCGGCTTTGCAAAGAAGACCTCTCCCTCTTCCTTCACAAAATCAAGTCTCTGAAACCAAAAGTATTCACCATTGCTGAAAGAGAAGCAAATCACAACCACCCCCTTTTTTTACAGAGATTTGCAGAGACTTTGGATCACTACTCCGCCATTTTCGATTCCTTAGAAGCGACACTACCGCCGAGCAGCAGCGAGAGGTTGGCAGTGGAGCAGATGTGGTTTGGGAGAGAGATAATGGACGTGGTGGCGAACGAAGGAACTAACAGAAGGCAAATCAGCCATCAAAGGTATGAATCATGGGAGTTGATCCTTCGAAGCTCAAGGTTTTCTAATCTTCCATTGAGCCCGTTTGCACTTTCTCAGGCTAAATTACTCCTCAGACTCCATTATCCTTCTGAGGGTTATCACCTTCATGTTCACAAAGATTCCTTCTTCCTGGGTTGGCAAAATCGGCCTCTTTTCTCCGTGTCTTCATGGCACTGA 1317 49.28 MGPFDSRNHRHRLQHEEEEAISDLHYQASRRLAASSPNAAHIRHLLLRCAQLITQADFSAAHRLISILSSYASPCGDSTERLVHQLSKALSHRLAASSPTVDAAASASMLMLMTMGEVVPSTNFGDENAYPVEFSSPFSDEAIHSCYLSLNQITPFIRFSHLTANQAILEAIGEEQRAIHILDFEIMHGVQWPPLMQALVERSKFYPPPMLRITGTGRDLNFLCKTGDRLSIFAQSLGLRFQFQPLLILNDHDHNRLIPSALTLNPNEALAVNCVFYLHRLCKEDLSLFLHKIKSLKPKVFTIAEREANHNHPLFLQRFAETLDHYSAIFDSLEATLPPSSSERLAVEQMWFGREIMDVVANEGTNRRQISHQRYESWELILRSSRFSNLPLSPFALSQAKLLLRLHYPSEGYHLHVHKDSFFLGWQNRPLFSVSSWH 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 621662 622978 + Bpe023769.1 Bpe09g00091 108491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00091 438 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 9 438 IPR005202 -
Bpe09g00091 438 ProSiteProfiles GRAS family profile. 33 438 IPR005202 -
Bpe09g00091 438 Pfam GRAS domain family 42 437 IPR005202 -
Bpe09g00091 438 PANTHER SCARECROW-LIKE PROTEIN 18 9 438 IPR030017 GO:0005634|GO:0010223
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00091 Bpe-Chr9:621662 Bpe11g01481 Bpe-Chr11:11017199 4.47E-79 dispersed
Bpe02g00902 Bpe-Chr2:7296721 Bpe09g00091 Bpe-Chr9:621662 3.26E-18 transposed
Bpe03g00731 Bpe-Chr3:27401326 Bpe09g00091 Bpe-Chr9:621662 1.08E-177 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21848 PF03514 GRAS 9.50E-115 CL0063 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00091 - - jre:108992395 535.798