Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00109 AGAAAGCGGCATTTCCTTCTGCGATCTTCATCAATGGCGGAGCAAGAGACGTTCGCTTTCCAGGCCGAGATCAATCAGCTTCTAAGTTTGATCATTAATACTTTCTACAGTAACAAGGAAATCTTTCTCCGTGAACTCATTAGCAATGCATCGGATGCGCTGGACAAGATTAGGTTTGAGAGTTTGACAGACAAGAGTAAGCTAGATTCTCAAAATGAACTTTTCATTCACATAGTACCTGACAAGACAAACAACTCACTGTCTATCATAGACAGTGGTATTGGCATGACCAAAGCTGATTTGGTAAATAATTTGGGAACAATTGCGAGGTCTGGAACGAAGGAATTCATGGAAGCTCTTGCTGCTGGGGCCGATGTGAGTATGATTGGACAGTTTGGTGTTGGTTTCTACTCGGCTTACCTTGTGGCTGATAAGGTCATTGTCACCACAAAGCACAATGATGATGAACAATATGTTTGGGAATCCCAAGCTGGAGGATCATTCACTGTAACCAGGGATTCTTCTGGTGAAAATCTTGGCAGGGGTACTAAGATAACTTTATATCTGAAGGAGGATCAACTCGAATATCTTGAGGAGCGCCGTGTGAAGGACTTAATTAAGAAGCACTCTGAGTTCATTAGCTACCCTATCTCTCTCTGGACTGAGAAGACCACTGAGAAAGAGATCTCTGATGATGAGGATGAGGAAGATAAGAAGGAAGAGGAAGGAAAGATTGAGGAGGTAGATGAAGAGAAGGAAAAGGAAGAAAAGAAGAAGAAGAAGATCAAGGAGGTATCATATGAGTGGTCTTTGGTCAACAAGCAGAAGCCCATTTGGATGCGGAAACCTGAAGAAATCACAAAGGAGGAGTATGCTGCATTCTACAAGAGCCTTACCAATGATTGGGAGGAGCACCTTGCAGTAAAGCACTTTTCGGTTGAGGGTCAACTGGAATTTAAGGCTGTTCTCTTTGTTCCTAAGAGGGCCCCATTTGATCTGTTCGACACGAAAAAGAAGCCCAATAACATCAAGCTCTATGTTCGCCGAGTCTTTATCATGGACAACTGTGAGGAACTGATTCCGGAGTATCTTGGTTTTGTTAAGGGCATTGTGGATTCTGAGGATCTGCCTTTGAACATCTCTAGAGAAATGCTACAGCAGAACAAGATTCTGAAGGTAATTAGAAAGAACTTGGTTAAAAAGTGCATTGAGCTCTTCTTTGAAATTGCTGAGAACAAGGAAGATTACAACAAGTTCTACGAATCATTCTCTAAAAACTTGAAGCTTGGAATCCACGAGGACTCCACCAACAAGGCAAAGATAGCTGAGCTACTTAGATACCACTCCACCAAGAGTGGTGATGAAATGACCAGCCTGAAGGATTATGTTACCAGAATGAAGGAGGGTCAGGATGACATCTATTACATTACTGGTGAGAGCAAGAAGGCCGTTGAGAATTCTCCTTTCCTTGAGAAGCTAAAGAAAAAGGGGTATGAAGTTCTCTACATGGTGGATGCCATAGATGAGTACGCAATTGGCCAGCTCAAAGAATTTGAGGGCAAGAAGCTTGTCTCTGCAACAAAAGAGGGTCTAAAACTCGGAGAGACTGAGGATGAGAAGAAGAAGAAGGAAACGCTGAAGGAGAAGTTTTCAGGTCTGTGCAGTGTGATCAAGGAAGTGTTGGGTGACAAAGTAGAGAAGGTCGTAGTATCCGATAGAGTTGTGGACTCTCCCTGCTGTTTGGTTACGGGTGAGTATGGATGGACTGCAAACATGGAGAGGATCATGAAGGCTCAGGCACTGAGAGACAGCAGCATGTCCGGGTATATGTCGAGCAAGAAAACCATGGAGATAAACCCAGAGAATCCCATCATGGAGGAGTTGAGAAAGAGAGCTGATGCCGACAAGAATGACAAATCTGTGAAGGACCTTGTCCTTCTTCTCTTTGAGACCTCCCTTCTTACCTCTGGGTTTAGCCTCGATGACCCCAACACCTTCGGCAACAGGATCCATAGGATGTTAAAGCTCGGCCTGAGCATTGATGACGATACTGCTGATGTAGATGCCGACGACGCAGAAATGCCACCATTGGAGGATGCAGATGCCGATGCAGAGGGCAGCAAGATGGAAGAAGTTGACTAA 2142 44.21 RKRHFLLRSSSMAEQETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDSQNELFIHIVPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVADKVIVTTKHNDDEQYVWESQAGGSFTVTRDSSGENLGRGTKITLYLKEDQLEYLEERRVKDLIKKHSEFISYPISLWTEKTTEKEISDDEDEEDKKEEEGKIEEVDEEKEKEEKKKKKIKEVSYEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCIELFFEIAENKEDYNKFYESFSKNLKLGIHEDSTNKAKIAELLRYHSTKSGDEMTSLKDYVTRMKEGQDDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAIGQLKEFEGKKLVSATKEGLKLGETEDEKKKKETLKEKFSGLCSVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMSGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFETSLLTSGFSLDDPNTFGNRIHRMLKLGLSIDDDTADVDADDAEMPPLEDADADAEGSKMEEVD 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 738247 741062 + Bpe023787.1 Bpe09g00109 108509

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00109 713 Gene3D - 442 528 - -
Bpe09g00109 713 Hamap Chaperone protein HtpG [htpG]. 13 675 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bpe09g00109 713 PANTHER HEAT SHOCK PROTEIN 81-2 12 711 - -
Bpe09g00109 713 PIRSF HSP90_HTPG 2 713 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bpe09g00109 713 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 38 192 IPR003594 -
Bpe09g00109 713 MobiDBLite consensus disorder prediction 225 253 - -
Bpe09g00109 713 PRINTS 90kDa heat shock protein signature 199 217 IPR020575 -
Bpe09g00109 713 PRINTS 90kDa heat shock protein signature 86 103 IPR020575 -
Bpe09g00109 713 PRINTS 90kDa heat shock protein signature 129 151 IPR020575 -
Bpe09g00109 713 PRINTS 90kDa heat shock protein signature 37 59 IPR020575 -
Bpe09g00109 713 PRINTS 90kDa heat shock protein signature 16 36 IPR020575 -
Bpe09g00109 713 PRINTS 90kDa heat shock protein signature 104 121 IPR020575 -
Bpe09g00109 713 PRINTS 90kDa heat shock protein signature 181 198 IPR020575 -
Bpe09g00109 713 SUPERFAMILY Ribosomal protein S5 domain 2-like 274 529 IPR020568 -
Bpe09g00109 713 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 15 224 IPR036890 -
Bpe09g00109 713 MobiDBLite consensus disorder prediction 686 713 - -
Bpe09g00109 713 SUPERFAMILY HSP90 C-terminal domain 553 674 IPR037196 -
Bpe09g00109 713 ProSitePatterns Heat shock hsp90 proteins family signature. 36 45 IPR019805 GO:0005524|GO:0006457|GO:0051082
Bpe09g00109 713 Gene3D - 273 441 - -
Bpe09g00109 713 Pfam Hsp90 protein 195 694 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bpe09g00109 713 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 12 711 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bpe09g00109 713 Coils Coil 222 268 - -
Bpe09g00109 713 CDD HATPase_Hsp90-like 25 213 - -
Bpe09g00109 713 SMART HKATPase_4 38 193 IPR003594 -
Bpe09g00109 713 Gene3D - 529 679 IPR037196 -
Bpe09g00109 713 MobiDBLite consensus disorder prediction 228 249 - -
Bpe09g00109 713 Gene3D - 13 239 IPR036890 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00109 K04079 HSP90A, htpG; molecular chaperone HtpG - sind:105176572 1175.61
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe03g00745 Bpe09g00109 CCT
Bpe08g01086 Bpe09g00109 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00109 Bpe-Chr9:738247 Bpe12g00442 Bpe-Chr12:10196057 0 dispersed
Bpe02g01732 Bpe-Chr2:19751520 Bpe09g00109 Bpe-Chr9:738247 0 transposed
Bpe03g00745 Bpe-Chr3:27533125 Bpe09g00109 Bpe-Chr9:738247 0 wgd
Bpe08g01086 Bpe-Chr8:12965762 Bpe09g00109 Bpe-Chr9:738247 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g722 . . . . Bpe09g00109 Bpe08g01086 . . Cmo16g01031 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo10g00880 Bda05g00671 Bda12g00984 . Bpe03g00745 Bma07g01240 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000587 3 3 3 2 4 2 5 5 4 3 3 3 4 4 3 4 3 7 3 3 3 4 5 0 4 3 1 4 4 3 102
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe09g00109 Bpe_Chr09 FPKM 5.267442 2.989527 4.030617 5.276563 4.760252 4.935406 5.615834 9.030622 7.541376 9.660971