Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00117 ATGGCTTCAAAATCAGGCGTTCAAACTTCCATTGAAGGGCAGAGGAAAGTTCTCGGCGACCAAACAGCAGAAGGAAACTCTCATACGCCTCAACCTTTGCAGATTAGCAAAACAGGCAAATCAGAATCGGTCACCCCACAAGACAATCCGTTAATTGTTCCAAAACTTCCTTTTGAAACTGCTGAAAATAAAGAAATAAATAACTCTTTTCATGAAGAGTCTTCCACTCCAAATTCCTTCGCTGATAAACTACACTTGAATTTATCTGTTCTCGATTCTACCCAAGCTCCAACCAGTGCTGATGATCAAAAGAAGAAGACATTAGAAAAAGCAGCCGTTTCGAAAGAGAGCGATGGAACCAAAAGTCATCCTATAACAAGTGGAAGTGCCAATAGTCGACCTGAGTTTATGGAGAGTGGAAAGAGTAGTAGTATTTGTAGGGGCAGCACGAGCAGTGATATGAGCGACGAGAGTACATGTAGTAGTTTAAGTAGCATGATTAGCAAGCCTCATAAGGCAAATGATATAGGATGGGAAGCAATTCAAGCAGTTCGAGCCAAAGTCGGCGTTTTGAGTGTAAGCCATTTCAGACCCTTGAAGAGATTAGGATGTGGGGATATTGGATCCGTTTATCTCTCGGAATTGAGAGGGACAAAGTGCTATTTCGCGATGAAAGTCATGGACAAAGAATCTCTCGAGGGTCGGAAGAAACTGATTCGAGCTCAGACCGAAAGAGAGATACTTCAAGCATTAGACCATCCTTTTCTTCCTACTTTGTATACTCATTTCGAGACTGATAAGTTATCTTGTTTAGTAATGGACTTTTGCCCTGGAGGTGACTTGCACACTCTTCGGCAGAGACAACCCGGAAAATATTTTTCGGAGCAAGCTGTCAAGTTTTATGTGGTAGAAATTCTTCTTGCTCTAGAGTATCTCCACATGCACGGAATTATTTATCGCGATCTGAAGCCAGAAAATGTTCTTGTGAGAGAGGATGGGCATATTATGCTTTCTGACTTCGACCTTTCTCTTCGTTGTGCCTTTAGCCCGACACTAGTGAAGTCTTCAGCGCCAGAGTCCAACCCCTTGAGGAAGAACCCTGTTTATTGCATCCAACCAGCCTGCATTGCACCCTCTTGCATTCAACCTTCATGTGTTGTTCCAACAACTTGCATTTCGCCTCGGTTCTTCCTAGGAAAATCGAAAAAAGACCAAAAACCTAAAAACGAAGCTGGAAACCAAGTCAGCCCGTTGCCAGAGCTGATCGCCGAGCCTACAAATGCTCGATCAATGTCATTTGTTGGAACTCATGAGTACTTAGCTCCTGAAATCATCAAGGGTGAAGGCCATGGCAGTGCTGTTGATTGGTGGACTTTTGGGATTTTTATCTATGAGCTTTTGTTTGGTAAGACTCCTTTCAAAGGGTCAGGCAATTTTGCCACCTTGGCCAACGTCGTGGGTCAACCTTTACGCTTTCCTGATTCGCCAGTGGTAAGCTTTTCAGCTAGGGATTTGATTAGAGGTTTACTTGTGAAAGAGCCTCAACATCGTTTGGCATACAAAAGGGGCGCAGCTGAAATTAAACAACACTCGTTTTTTGAAGGGGTTAACTGGGCGCTAGTTAGGTGTGCTAGCCCACCGGAGATTCCAAGACCATTTGAAATCGAAAGAATTCCAGCTCCAACTTCGAGAACAATCGGCAAAGGTGGTAACGCTTGTCCTGATCAAAGTAACTATTTGGAATTTGATTTCATCTAA 1758 43.4 MASKSGVQTSIEGQRKVLGDQTAEGNSHTPQPLQISKTGKSESVTPQDNPLIVPKLPFETAENKEINNSFHEESSTPNSFADKLHLNLSVLDSTQAPTSADDQKKKTLEKAAVSKESDGTKSHPITSGSANSRPEFMESGKSSSICRGSTSSDMSDESTCSSLSSMISKPHKANDIGWEAIQAVRAKVGVLSVSHFRPLKRLGCGDIGSVYLSELRGTKCYFAMKVMDKESLEGRKKLIRAQTEREILQALDHPFLPTLYTHFETDKLSCLVMDFCPGGDLHTLRQRQPGKYFSEQAVKFYVVEILLALEYLHMHGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAFSPTLVKSSAPESNPLRKNPVYCIQPACIAPSCIQPSCVVPTTCISPRFFLGKSKKDQKPKNEAGNQVSPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFIYELLFGKTPFKGSGNFATLANVVGQPLRFPDSPVVSFSARDLIRGLLVKEPQHRLAYKRGAAEIKQHSFFEGVNWALVRCASPPEIPRPFEIERIPAPTSRTIGKGGNACPDQSNYLEFDFI 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 795239 797575 + Bpe023793.1 Bpe09g00117 108517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00117 585 Pfam Protein kinase domain 198 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00117 585 Pfam Protein kinase domain 430 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00117 585 Gene3D Transferase(Phosphotransferase) domain 1 427 550 - -
Bpe09g00117 585 Gene3D Transferase(Phosphotransferase) domain 1 280 382 - -
Bpe09g00117 585 ProSiteProfiles Protein kinase domain profile. 196 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00117 585 MobiDBLite consensus disorder prediction 102 117 - -
Bpe09g00117 585 Gene3D Phosphorylase Kinase; domain 1 195 279 - -
Bpe09g00117 585 MobiDBLite consensus disorder prediction 119 166 - -
Bpe09g00117 585 CDD STKc_phototropin_like 194 552 - -
Bpe09g00117 585 SMART serkin_6 196 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00117 585 MobiDBLite consensus disorder prediction 1 48 - -
Bpe09g00117 585 MobiDBLite consensus disorder prediction 94 166 - -
Bpe09g00117 585 MobiDBLite consensus disorder prediction 1 79 - -
Bpe09g00117 585 PANTHER FLIPPASE KINASE 1-RELATED 13 584 - -
Bpe09g00117 585 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL2 13 584 - -
Bpe09g00117 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Bpe09g00117 585 SUPERFAMILY Protein kinase-like (PK-like) 173 557 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01280 Bpe-Chr8:14191260 Bpe09g00117 Bpe-Chr9:795239 4.36E-144 dispersed
Bpe09g00117 Bpe-Chr9:795239 Bpe11g01016 Bpe-Chr11:7560216 0 dispersed
Bpe03g00751 Bpe-Chr3:27571401 Bpe09g00117 Bpe-Chr9:795239 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63497 PF00069 Pkinase 3.70E-37 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00117 K08286 - zju:107434015 845.884