Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00129 ATGGCGGACTCGGACAACGACTCTTTTGGACACACAGCGACGAACATTGAGCAATCCCCGAGGGAGCAAGACAGACTGTTGCCGATTGCTAACGTGAGCAGGATAATGAAGAAGGCCTTACCGGCAAACGCGAAGATCTCCAAAGACGCGAAGGAGACGGTTCAGGAGTGCGTTTCCGAATTCATCAGCTTCGTAACCGGCGAGGCGTCGGACAAGTGCCAGAGGGAGAAGAGGAAGACGATCAACGGCGACGATTTACTCTGGGCGATGACAACGCTAGGGTTTGAGAACTACATGGAGCCTCTGAAGATATACCTGCAGAGGTTTAGGGACATAGAAGGGGAGAAAACGGCTGTGGCGCGTGATAAAGACGGCAGTGGGAGGAGCGTAGGTGATCTCGGTGGTGGTGGGGCAGGTGGGCCATACGGAAGCGGAATGGGGGTGACGGTGATGGGCGGCCAGAATCAACTTCATCAGGGACACGTGTACAGTGGAAGCGAATTCCATCAGACGGCTGTGATTAGTGGACAAAGTCGGGGCGGGCCTGGTTATTCCGGTCACGGATCCAATACGGGTCGGTCCAGGTAG 588 55.44 MADSDNDSFGHTATNIEQSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFENYMEPLKIYLQRFRDIEGEKTAVARDKDGSGRSVGDLGGGGAGGPYGSGMGVTVMGGQNQLHQGHVYSGSEFHQTAVISGQSRGGPGYSGHGSNTGRSR 195
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 873594 874181 - Bpe023804.1 Bpe09g00129 108529
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00129 195 MobiDBLite consensus disorder prediction 1 24 - -
Bpe09g00129 195 ProSitePatterns NF-YB/HAP3 subunit signature. 57 73 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bpe09g00129 195 Gene3D Histone, subunit A 14 133 IPR009072 GO:0046982
Bpe09g00129 195 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2 1 167 - -
Bpe09g00129 195 MobiDBLite consensus disorder prediction 1 21 - -
Bpe09g00129 195 MobiDBLite consensus disorder prediction 173 195 - -
Bpe09g00129 195 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 26 90 IPR003958 -
Bpe09g00129 195 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 167 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bpe09g00129 195 SUPERFAMILY Histone-fold 23 133 IPR009072 GO:0046982
Bpe09g00129 195 PRINTS CCAAT-binding transcription factor subunit A signature 54 72 - -
Bpe09g00129 195 PRINTS CCAAT-binding transcription factor subunit A signature 92 110 - -
Bpe09g00129 195 PRINTS CCAAT-binding transcription factor subunit A signature 73 91 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bpe09g00129 Bpe11g00587 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00646 Bpe-Chr7:13218659 Bpe09g00129 Bpe-Chr9:873594 7.24E-77 dispersed
Bpe09g00129 Bpe-Chr9:873594 Bpe14g00737 Bpe-Chr14:5698458 1.52E-69 dispersed
Bpe11g00587 Bpe-Chr11:4466290 Bpe09g00129 Bpe-Chr9:873594 1.29E-74 wgd
Bpe03g00757 Bpe-Chr3:27614733 Bpe09g00129 Bpe-Chr9:873594 1.10E-43 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21851 PF00808 CBFD_NFYB_HMF 3.40E-27 CL0012 Bpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00129 K08065 - qsu:112015911 248.44