Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe09g00129 | ATGGCGGACTCGGACAACGACTCTTTTGGACACACAGCGACGAACATTGAGCAATCCCCGAGGGAGCAAGACAGACTGTTGCCGATTGCTAACGTGAGCAGGATAATGAAGAAGGCCTTACCGGCAAACGCGAAGATCTCCAAAGACGCGAAGGAGACGGTTCAGGAGTGCGTTTCCGAATTCATCAGCTTCGTAACCGGCGAGGCGTCGGACAAGTGCCAGAGGGAGAAGAGGAAGACGATCAACGGCGACGATTTACTCTGGGCGATGACAACGCTAGGGTTTGAGAACTACATGGAGCCTCTGAAGATATACCTGCAGAGGTTTAGGGACATAGAAGGGGAGAAAACGGCTGTGGCGCGTGATAAAGACGGCAGTGGGAGGAGCGTAGGTGATCTCGGTGGTGGTGGGGCAGGTGGGCCATACGGAAGCGGAATGGGGGTGACGGTGATGGGCGGCCAGAATCAACTTCATCAGGGACACGTGTACAGTGGAAGCGAATTCCATCAGACGGCTGTGATTAGTGGACAAAGTCGGGGCGGGCCTGGTTATTCCGGTCACGGATCCAATACGGGTCGGTCCAGGTAG | 588 | 55.44 | MADSDNDSFGHTATNIEQSPREQDRLLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFENYMEPLKIYLQRFRDIEGEKTAVARDKDGSGRSVGDLGGGGAGGPYGSGMGVTVMGGQNQLHQGHVYSGSEFHQTAVISGQSRGGPGYSGHGSNTGRSR | 195 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 873594 | 874181 | - | Bpe023804.1 | Bpe09g00129 | 108529 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe09g00129 | 195 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Bpe09g00129 | 195 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 57 | 73 | IPR003956 | GO:0005634|GO:0006355|GO:0043565 | |
Bpe09g00129 | 195 | Gene3D | Histone, subunit A | 14 | 133 | IPR009072 | GO:0046982 | |
Bpe09g00129 | 195 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2 | 1 | 167 | - | - | |
Bpe09g00129 | 195 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bpe09g00129 | 195 | MobiDBLite | consensus disorder prediction | 173 | 195 | - | - | |
Bpe09g00129 | 195 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 26 | 90 | IPR003958 | - | |
Bpe09g00129 | 195 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 1 | 167 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
Bpe09g00129 | 195 | SUPERFAMILY | Histone-fold | 23 | 133 | IPR009072 | GO:0046982 | |
Bpe09g00129 | 195 | PRINTS | CCAAT-binding transcription factor subunit A signature | 54 | 72 | - | - | |
Bpe09g00129 | 195 | PRINTS | CCAAT-binding transcription factor subunit A signature | 92 | 110 | - | - | |
Bpe09g00129 | 195 | PRINTS | CCAAT-binding transcription factor subunit A signature | 73 | 91 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe09g00129 | Bpe11g00587 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe07g00646 | Bpe-Chr7:13218659 | Bpe09g00129 | Bpe-Chr9:873594 | 7.24E-77 | dispersed | |
Bpe09g00129 | Bpe-Chr9:873594 | Bpe14g00737 | Bpe-Chr14:5698458 | 1.52E-69 | dispersed | |
Bpe11g00587 | Bpe-Chr11:4466290 | Bpe09g00129 | Bpe-Chr9:873594 | 1.29E-74 | wgd | |
Bpe03g00757 | Bpe-Chr3:27614733 | Bpe09g00129 | Bpe-Chr9:873594 | 1.10E-43 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21851 | PF00808 | CBFD_NFYB_HMF | 3.40E-27 | CL0012 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe09g00129 | K08065 | - | qsu:112015911 | 248.44 |