Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00135 GATCCGAATCGGGATGAGTTTCAGGATAGCTCTGAAACTCGCTCTAGTCTTGTAGGCGGCGCTAGGTATAAGCTGATGTCTCCGGCGAAGCTTCCGATCTCTAGGGCCACTTGCATTACGATCCCACCCGGGCTTAGCCCTGGTTCATTTTTGGAGTCTCCAGCAGAGCCTTCTCCTACCACTGGAACCTTTATAAAGTCTCATATGGTTCATGGCTATTCCAGTTCAGGAACATATCCAATTTCCACATCGGTTTTCTCAAATTCAGGCATCTCCGAAGAAGGGAAAGCCAGCGTGTTTGATTTTAAGCCACCTATAAAAGCAAATATGGTTTCTGCCGATATCAATGGCCATAGGAGTGAACAATCTGGCCAAGTCCAAGTTTATGGTGAGCTTTTCTCTCCCTACATCATAATCAGTATGATGATCAGTCTTCTTAAGTTCGACGAGTCTCTCAGCCCTGATCACATGGTCATTGCAGGGTTTAGTGCTCCCGCTGAGTTCACCGGCAATGATATTAGTCAGAGTCTGCTCACCAATCCAGAAGTTCAAGCCACAGAGTTTGATCATAAAGGAAGTGGAGCTTCAATGGCGGCCGAGAGGTCATCTGATGATGGATATAATTGGCGAAAATATGGACAGAAGCATGTTAAAGGGAGTGAATTTCCTCGTAGCTATTACAAATGTACTCATCCTAACTGTGAAGTGAAAAAGTTGTTTGAACGCTCTCATGAGGGACAAATAACCGAGATTATCTACAAGGGAACCCATGATCATCCTAAACCTCAGCCAAGTCGACGATGTACATCTTCTAACAATATGTCCATGCCAGAAGAAAAACTTGATAAGCCCACATCCTTACCTGGACAAGATGACAAACCCACTAACAGGTACAGTCATAATTTTCATTCTGCTGATCCAAATGTTGCTTCAGAGCATTCTCTTGTCATGGCTACTGATGACAGTATCGAAGGCTCTGGTTCTATGCCAAACAAGAACCATGATGAAGCAGATGATGACAATCCTTTCTCCAAGAAAAGCAGGAGAATGGAAGCTGGTGGATTTGAAGTAACTCCAGTTATTAAGCCCATACGGGAGCCACGGGTAGTTGTTCAAACTTTGAGTGAGGTCGATATACTCGATGATGGCTACCGCTGGCGCAAATACGGGCAGAAAGTAGTTAGAGGAAATCCAAATCCAAGGAGCTATTACAAGTGCACAAACATCGGATGTCCTGTGAGAAAACATGTGGAAAGGGCATCTCACGACCCAAAAGCTGTGATAACCACATATGAAGGTAAACACAATCATGATGTTCCGACAGCAAAATCTAGCAGCCACGATACAGCCAGTTCACCCTCGATGGTATGCCCATCCAAGTTTAGAGCGGAAGATGTTCATACCATTAGCCTCGATCTAGGGGTTGGTATTAGCAATCCTACGGAGAATAGATCGAACGACTATGGCCAGACGGGTCAATATGAGCTTTCCCATTGTCAAACTCTAAATGGCAATTCCAACTTTCGGGTAGTTCAAGCAACCCCTGTCTCTACACATTTCAGTGTTCTAAATGGTGGTATGAGTCAA 1587 44.61 DPNRDEFQDSSETRSSLVGGARYKLMSPAKLPISRATCITIPPGLSPGSFLESPAEPSPTTGTFIKSHMVHGYSSSGTYPISTSVFSNSGISEEGKASVFDFKPPIKANMVSADINGHRSEQSGQVQVYGELFSPYIIISMMISLLKFDESLSPDHMVIAGFSAPAEFTGNDISQSLLTNPEVQATEFDHKGSGASMAAERSSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHEGQITEIIYKGTHDHPKPQPSRRCTSSNNMSMPEEKLDKPTSLPGQDDKPTNRYSHNFHSADPNVASEHSLVMATDDSIEGSGSMPNKNHDEADDDNPFSKKSRRMEAGGFEVTPVIKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNIGCPVRKHVERASHDPKAVITTYEGKHNHDVPTAKSSSHDTASSPSMVCPSKFRAEDVHTISLDLGVGISNPTENRSNDYGQTGQYELSHCQTLNGNSNFRVVQATPVSTHFSVLNGGMSQ 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 910747 914147 - Bpe026204 Bpe09g00135 108535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00135 529 ProSiteProfiles WRKY domain profile. 198 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe09g00135 529 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 524 IPR044810 GO:0003700
Bpe09g00135 529 PANTHER WRKY TRANSCRIPTION FACTOR 20 ISOFORM X1-RELATED 14 524 - -
Bpe09g00135 529 SMART WRKY_cls 380 439 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe09g00135 529 SMART WRKY_cls 203 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe09g00135 529 SUPERFAMILY WRKY DNA-binding domain 201 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe09g00135 529 ProSiteProfiles WRKY domain profile. 375 440 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe09g00135 529 MobiDBLite consensus disorder prediction 253 347 - -
Bpe09g00135 529 Gene3D WRKY domain 365 441 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe09g00135 529 Gene3D WRKY domain 193 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe09g00135 529 MobiDBLite consensus disorder prediction 435 455 - -
Bpe09g00135 529 MobiDBLite consensus disorder prediction 331 347 - -
Bpe09g00135 529 MobiDBLite consensus disorder prediction 289 308 - -
Bpe09g00135 529 SUPERFAMILY WRKY DNA-binding domain 372 440 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe09g00135 529 Pfam WRKY DNA -binding domain 204 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe09g00135 529 Pfam WRKY DNA -binding domain 381 437 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe09g00135 529 MobiDBLite consensus disorder prediction 265 279 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00760 Bpe09g00135 CCT
Bpe03g00760 Bpe09g00135 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00052 Bpe-Chr8:278046 Bpe09g00135 Bpe-Chr9:910747 8.52E-94 dispersed
Bpe08g00665 Bpe-Chr8:7088375 Bpe09g00135 Bpe-Chr9:910747 1.60E-47 dispersed
Bpe09g00095 Bpe-Chr9:657603 Bpe09g00135 Bpe-Chr9:910747 3.51E-81 dispersed
Bpe09g00135 Bpe-Chr9:910747 Bpe11g00067 Bpe-Chr11:458552 2.32E-82 dispersed
Bpe04g01294 Bpe-Chr4:19204471 Bpe09g00135 Bpe-Chr9:910747 3.10E-79 transposed
Bpe03g00760 Bpe-Chr3:27637758 Bpe09g00135 Bpe-Chr9:910747 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21853 PF03106 WRKY 3.10E-25 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00135 - - qsu:112006109 636.721