Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00151 ATGGCGGTCACAGATGTACAAAATCCCCTGCTTGGAGAAACCACTTGTGGTTCCCTACTGCAGAAACTGCAAGAAATATGGAATGAGGTTGGTGAAAGTGATGAAGAGAGGGATAAAATGCTGCTACAGCTGGAGCAGGAATGCTTGGATGTATACAAGAGAAAGGTTGAGCAGGCTGCCAAGTCAAGGGCACAACTTCTGCAGTCACTGTCAGATGGCAAGCAAGAACTTTCAAATCTTCTGACAGCTCTTGGAGAAAAAAGCTTTGTTGGGATTGCAGAGGAAACTTCTCAAACAATTAAAGAACAGCTTGCTGATATAGCGCCAACACTTGCACAATTATTGAAACAGAAAGAAGTGAGGATGAAGGAGTTTTCAGATGTACAATCACAGATTCAGAAGATAAGTGGAGAAATTGCAGGGAAACTAAAACTTAATGAGACTCCAGCAGTTGACGAAGCTGACCTATCCTTGAAAAAACTGGAAGAGTACAGATTCCAACTTCAGGAACTCCAAAAAGAGAAAAGTGACAGATTGCAAAAAGTCCTCGAATTTGTGAGCACTGTGCATGATCTTTGTGCTGTCCTTGGAATGGATTTCTTTAGTGCTGTCACTGAGGTGCATCCAAGCTTAGATGACTCTACCAGTGTGCAATCCAAAAGCATCAGCGATGATACTTTATCCAGGCTGGAAAATACAGTCTTATTACTCAAGCAAGATAAGAAACAGAGGCTGCATAAGCTTCAAGAGTTCGCAGCTCAGCTAATTGATCTTTGGAATTTGATGGACACTCCCATTGAAGAAAGAAGGATGTTTGACCATATAACTTGTAATATGTCTGCTTCAGTAGATGAGGTGACTGTTCCCGGAGCTCTTGCCCTGGATTTGATCGAGCAGGCTGAGACAGAAGTTGAAAGACTTGATCAGCTCAAAGCTAGTCGGATGAAAGAAATTGCTTTCAAGAAGCAGGATGAACTTGAGGGGATATTTGCTCATACTCACATAGAAATTGATTCAGAGGCTGCTCGAGAAAACATTATGACACTGATTGACAGTGGTAACGCTGAGCCGGCTGAGTTAATTGCTAACATGGATAATCAAATAGCTCAAGCAAAAGATGAAGCCCTTAGCAGAAAAGAGATATTGGACAAGGTTGAGAAGTGGATGTCAGCTTGTGAAGAAGAGAGTTGGTTAGATGACTACAATAGGGATGACAATAGGTACAATTCAAGTAGGGGAGCACACTTAAACCTCAAGCGTGCAGAGAAAGCTAGAGTTCTAGTCAATAAAATTCCAGCTCTTGTTGACTCATTGGTCGCCAAAACTCGAGCATGGGAAGAAGATCGAGGTGTATCATTTAGTTATGACGGTGTTCCTCTTCTTGCCATGCTAGATGAGTATGTCATGCTCAGGCATCAAAAAGAGGAAGAAAAACGAAGGATGAGAGACAGCAAAAAGTATAATGAGCAGCAAAACACAGACCAAGAAGCCAGTCTCGGTTCAAAGCTCACCCCAGTTCGCACAATCAGTACAAAAAAGTCTATGGACGCCCGGGCAAATGGAAGTGGTAATGGAACGCCCACCTCGGGAAGACGTTTATCTGGTAATCATCATCAAAACGGAGCTAAATTGACATCGAGAGAAGGCCGAAGGGATAGTACAAGGCTCGCAGCCCCCGCAAATTACGTCGCCATCACAAAAGAGGACTCGGCATCGAACATTTCAGACAGTAATCCACCCGATTCAGCTTCACCATAA 1758 43.17 MAVTDVQNPLLGETTCGSLLQKLQEIWNEVGESDEERDKMLLQLEQECLDVYKRKVEQAAKSRAQLLQSLSDGKQELSNLLTALGEKSFVGIAEETSQTIKEQLADIAPTLAQLLKQKEVRMKEFSDVQSQIQKISGEIAGKLKLNETPAVDEADLSLKKLEEYRFQLQELQKEKSDRLQKVLEFVSTVHDLCAVLGMDFFSAVTEVHPSLDDSTSVQSKSISDDTLSRLENTVLLLKQDKKQRLHKLQEFAAQLIDLWNLMDTPIEERRMFDHITCNMSASVDEVTVPGALALDLIEQAETEVERLDQLKASRMKEIAFKKQDELEGIFAHTHIEIDSEAARENIMTLIDSGNAEPAELIANMDNQIAQAKDEALSRKEILDKVEKWMSACEEESWLDDYNRDDNRYNSSRGAHLNLKRAEKARVLVNKIPALVDSLVAKTRAWEEDRGVSFSYDGVPLLAMLDEYVMLRHQKEEEKRRMRDSKKYNEQQNTDQEASLGSKLTPVRTISTKKSMDARANGSGNGTPTSGRRLSGNHHQNGAKLTSREGRRDSTRLAAPANYVAITKEDSASNISDSNPPDSASP 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1027957 1036224 - Bpe023824.1 Bpe09g00151 108551

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00151 585 Gene3D - 368 501 - -
Bpe09g00151 585 MobiDBLite consensus disorder prediction 475 585 - -
Bpe09g00151 585 MobiDBLite consensus disorder prediction 491 542 - -
Bpe09g00151 585 MobiDBLite consensus disorder prediction 566 585 - -
Bpe09g00151 585 Coils Coil 297 317 - -
Bpe09g00151 585 Coils Coil 154 181 - -
Bpe09g00151 585 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 5 578 IPR007145 GO:0000226|GO:0008017
Bpe09g00151 585 MobiDBLite consensus disorder prediction 475 490 - -
Bpe09g00151 585 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 1 5 578 - -
Bpe09g00151 585 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 508 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00151 K16732 PRC1, ASE1, MAP65; Ase1/PRC1/MAP65 family protein - qsu:112012954 907.131
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe08g01113 Bpe09g00151 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00098 Bpe-Chr3:1475419 Bpe09g00151 Bpe-Chr9:1027957 1.80E-158 dispersed
Bpe03g00333 Bpe-Chr3:5289717 Bpe09g00151 Bpe-Chr9:1027957 1.96E-162 dispersed
Bpe04g01946 Bpe-Chr4:24326997 Bpe09g00151 Bpe-Chr9:1027957 1.79E-172 dispersed
Bpe07g00967 Bpe-Chr7:15466204 Bpe09g00151 Bpe-Chr9:1027957 2.19E-142 dispersed
Bpe09g00151 Bpe-Chr9:1027957 Bpe15g01005 Bpe-Chr15:19554650 0 dispersed
Bpe02g01951 Bpe-Chr2:21431904 Bpe09g00151 Bpe-Chr9:1027957 0 transposed
Bpe08g01113 Bpe-Chr8:13142551 Bpe09g00151 Bpe-Chr9:1027957 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g575 . . Bda07g00378 Bda09g00408 Bpe09g00151 Bpe08g01113 . Bma13g01085 . Cmo06g00891 . . . . . . . . . . . . . . Cla10g00472 Cam10g0460 Cec10g0481 Cco10g0469 Clacu10g0479 Cmu10g1308 Cre10g0713 . Cone9ag0051 Cone14ag1180 Cone15ag1195 . Csa03g00474 . Cme06g02836 Blo07g00883 . . . . . Bma07g01285 Bma14g00324 Sed08g2977 . . . . . . . . Bhi11g00574 Tan01g1748 Cmetu06g2464 . . . . . . . . . . . Lsi05g00562 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003979 3 1 2 4 2 1 2 1 1 1 1 1 1 1 1 2 1 3 1 1 1 1 1 1 1 1 1 3 2 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe09g00151 Bpe_Chr09 FPKM 9.411875 10.467927 23.360544 24.576893 4.229662 4.502054 4.679327 10.205252 9.839643 12.287964