Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00157 ATGTCTAGAGAGCCGAGGTACAGAGGTGTGAGGAAAAGGCCGTGGGGGAGATTCGCTGCCGAGATCAGAGACCCTTGGAAGAAGTCCAGAGTGTGGCTCGGGACGTTTGATTCTGCTGAGGACGCGGCGCGTGCCTACGACGTCGCCGCTAGGACTCTCCGGGGTCCCAAGGCAAGAACCAATTTCCCTCCCGCGAACCCTAGCTTGCTAGATGTTCCTCCTCCTCGAAACCCGATCGCTCCCAATGAGGTAGCTGCCTTTGATCCTTTCCTTGATAATCAGTTTCTTAACGCTGATGACTTTGAAGAGCCCCCGATTGACCCCCAGAGGCCGACCTCTAGCAGTCTGAGCTCCACCGTTGAGTCTTTCAGTGGGCCTAGACCTCGATCAGCGACAGTGGCGCCTCCTGCTTCGGCTTCAGCTACAGCCTCGAGGAGGCATCCTCGTTCTCCGCCAGTTTCCCCTGAGGACTGCCACAGTGACTGTGATTCGTCGTCATCAGTGATCGACGACTGTGATGTTGCCTCCTCGTCCATGGTCCGTAGACCTTTGCAAATCGACCTCAATTTCCCTCCATTGGAGAACGTCGACTATTCCGGTGATGACCTTCTCTGCACCGATTTATGCCTTTGA 633 55.77 MSREPRYRGVRKRPWGRFAAEIRDPWKKSRVWLGTFDSAEDAARAYDVAARTLRGPKARTNFPPANPSLLDVPPPRNPIAPNEVAAFDPFLDNQFLNADDFEEPPIDPQRPTSSSLSSTVESFSGPRPRSATVAPPASASATASRRHPRSPPVSPEDCHSDCDSSSSVIDDCDVASSSMVRRPLQIDLNFPPLENVDYSGDDLLCTDLCL 210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1059463 1060095 - Bpe023829.1 Bpe09g00157 108557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00157 210 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3-RELATED 3 188 - -
Bpe09g00157 210 MobiDBLite consensus disorder prediction 56 82 - -
Bpe09g00157 210 Pfam AP2 domain 5 55 IPR001471 GO:0003700|GO:0006355
Bpe09g00157 210 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Bpe09g00157 210 MobiDBLite consensus disorder prediction 98 162 - -
Bpe09g00157 210 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 188 - -
Bpe09g00157 210 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Bpe09g00157 210 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Bpe09g00157 210 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Bpe09g00157 210 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Bpe09g00157 210 MobiDBLite consensus disorder prediction 108 126 - -
Bpe09g00157 210 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Bpe09g00157 210 Gene3D AP2/ERF domain 6 64 IPR036955 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00777 Bpe09g00157 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00522 Bpe-Chr7:10998146 Bpe09g00157 Bpe-Chr9:1059463 1.47E-35 dispersed
Bpe09g00157 Bpe-Chr9:1059463 Bpe14g00619 Bpe-Chr14:5122835 6.48E-36 dispersed
Bpe10g00806 Bpe-Chr10:14174877 Bpe09g00157 Bpe-Chr9:1059463 5.00E-24 transposed
Bpe13g00838 Bpe-Chr13:14617865 Bpe09g00157 Bpe-Chr9:1059463 1.58E-24 transposed
Bpe13g01483 Bpe-Chr13:20192258 Bpe09g00157 Bpe-Chr9:1059463 1.69E-25 transposed
Bpe03g00777 Bpe-Chr3:27747543 Bpe09g00157 Bpe-Chr9:1059463 1.74E-89 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21856 PF00847 AP2 2.00E-14 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00157 K09286 - rcu:8269014 215.312