Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00174 ATGAGTTTTTCCCATCCAATCTCGTTTCTCTCAGCAAAACCATCTGTTTCGGACTCATCGAAAATCTATTTGCTGTCATGCCAAAAACCTCGTTCGATTTTCTCTCCGTCAAATTCGGTTGTTGAGGTTCAGTGCGGCCTACGTGAGTTACGGGAGCGAATTCATTCTGTAAAGAGTACGCAGAAAATCACTGAAGCGATGAAGCTCGTTGCTGCATCTAAAGTTCGACGGGCACAGGAAGCAGTCATCAATGGCCGACCGTTCTCGGAAACCCTACTGGAGGTTCTGTACGAAATCAACGAGCAGCTTCAAGCAGATTCAATAGATGTTCCTTTAACAAACGTTCGCCCAGTAAAAAGAGTTGCTCTCGTAGTAATCACTGGAAATCGAGGCCTTTGCGGCGGCTTCAACAATTTGGTTATAAGAAAAGCCGAAAATCGAATCGCTGAATTGAGGAACCTCGGAGTGGATCACACACTAATCAGCGTCGGAACCATGGGGAATTCTTATTTCATGCGCAGGCCAAATGTCGAAGTAGACAGTTTCGTTGAAAGAGGTCCATTTCCAACTGTGAAAGAAGCTCAAACTGTTGCAGACAAAGTGTTTTCTTGTTTTCTCAGTGAAGAAGCGGATAAGGTTGAGCTTTTATACACAAAATTCGTCTCTCTAATTTCTTCAAGCCCTGTGATCCACACACTGCTTCCTCTTTCTCGAAAGGGCAAAATCCTTGATGTGAATGGAAATTCCATTGACGCAGAGGAAGATGAGCTCTTCAGATTAACGACAAAGGAAGGGAAATTGAGTCTAGAAAGAGAAAAAATTGAGAGAGAGAAGAAAGGGTTCACTCCATTTTTACAATTCGAGCAGGACCCAGTTCAGATCGTCGATGCTATGATGCCTCTATATTTGAATAGTCAGATTTTGAGGGCATTGCAGGAATCCACAGCCAGTGAATTGGCTGCTAGAATGACGGCTATGGCGAATGCTTCCGATAATGCAGTTGAATTAAAGAGGTCTCTTTCGATTGCATACAACAGGGAAAGACAAGCCAAAATTACAGGAGATATTTTGGAGATTGTAGCTGGAGCTGAGGCACTTAAAGGTTTGAATTGA 1113 43.31 MSFSHPISFLSAKPSVSDSSKIYLLSCQKPRSIFSPSNSVVEVQCGLRELRERIHSVKSTQKITEAMKLVAASKVRRAQEAVINGRPFSETLLEVLYEINEQLQADSIDVPLTNVRPVKRVALVVITGNRGLCGGFNNLVIRKAENRIAELRNLGVDHTLISVGTMGNSYFMRRPNVEVDSFVERGPFPTVKEAQTVADKVFSCFLSEEADKVELLYTKFVSLISSSPVIHTLLPLSRKGKILDVNGNSIDAEEDELFRLTTKEGKLSLEREKIEREKKGFTPFLQFEQDPVQIVDAMMPLYLNSQILRALQESTASELAARMTAMANASDNAVELKRSLSIAYNRERQAKITGDILEIVAGAEALKGLN 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1195173 1196285 - Bpe023845.1 Bpe09g00174 108574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00174 370 Hamap ATP synthase gamma chain [atpG]. 44 366 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bpe09g00174 370 PANTHER ATP SYNTHASE GAMMA CHAIN 1 366 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bpe09g00174 370 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 1 366 - -
Bpe09g00174 370 Gene3D - 113 237 - -
Bpe09g00174 370 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 46 366 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bpe09g00174 370 PRINTS ATP synthase gamma subunit signature 344 365 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bpe09g00174 370 PRINTS ATP synthase gamma subunit signature 118 137 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bpe09g00174 370 PRINTS ATP synthase gamma subunit signature 313 332 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bpe09g00174 370 PRINTS ATP synthase gamma subunit signature 211 228 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bpe09g00174 370 Gene3D ATP synthase, gamma subunit, helix hairpin domain 265 366 - -
Bpe09g00174 370 Gene3D ATP synthase, gamma subunit, helix hairpin domain 45 112 - -
Bpe09g00174 370 CDD F1-ATPase_gamma 47 363 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bpe09g00174 370 Pfam ATP synthase 47 366 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bpe09g00174 370 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 46 366 IPR035968 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00174 Bpe-Chr9:1195173 Bpe12g00525 Bpe-Chr12:11130742 2.53E-24 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00174 K02115 - zju:107432905 517.694