Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00183 ATGAGCTGCTTTCCATGCTGCATATCACAAGAAAGATCGAATAGGAAGTCATTGAAAAAGAGCATTAAGGAGTACCGTGATGCAAAAAATTTAGCCTCAATTGCTAACATCTCCTTCAAATCTGATGGCAGTAAAAGAAGATATATAAATGAAGAGATAAAGAAGATAGGTCAAGGAAACATATCTGCTCAGATTCTCTCTTTCCAAGAGCTCTGCACTGCAACTGAAAATTTCAACCCGGGTAATTTGATAGGCGAAGGTGGCTTTGGAAGAGTTTACAAGGGTCACATTGGAGGAAGCAAACAGGCTGTGGCTGTCAAGCAACTCGACAGAAATGGTTTTCAGGGAAATAGAGAGTTCCTTGTAGAGGTTGTGATGTTGAGTCTTCTCCACCATCCTAATCTGGTGAATTTGGTCGGATATTGCACTGATGGTGAGCAGAGGATTCTTGTTTATGAGTACATGTCTAATGGATCGTTAGAAGATCACCTTCTTGATTTAGCTCCAAACAAAAGTCCTCTGGATTGGAAAACTAGGATGAAAATAGCAGAAGGAGCTGCAAAAGGACTCGAATACTTGCATGAAACAGCAGATCCCCCAGTGATATACCGCGATTTCAAAGCATCAAACATACTGTTGGATGAAGAATTCAACCCGAAACTATCCGATTTTGGCCTCGCCAAATTAGGTCCAACCGGCGGTAAAACTCATGTATCGACTAGAGTTATGGGAACCTATGGTTACTGCGCTCCAGAATACGCACTAACGGGGCAATTAACCACAAAATCCGATGTTTATAGCTTTGGAGTAGTGTTTCTGGAGATAATCACAGGAAAAAGAGTAATAGACAATGCCAGACCTATCGAAGAACAAAACCTAGTTACTTGGGCTCAACCACTGTTTAAAGACAGAAGGAAGTTTACCTTAATGGCAGACCCGATGCTGGAGGGGAATTACCCAGTGAAGGGGCTATACCAAGCCCTGGCAGTTGCAGCAATGTGCCTTCAAGAGGAAGCAAGCACACGGCCATTGATAAGCGACGTGGTAACCGCTCTTGAGTTTTTAGCTACAGATAAAAATCAGGAGGCTAAGACGGCTCCTCCTGCGAGCAACTGCGGTAGTAAACTGAGCAGAGTTGTGGAAGTTATGGCTATGGGGTTTTCCTCCTCCCAAACTACGCCTTTGCGGCCATTCTGGCCTTCCTGCTTCTTGATATACCGTTCTGGTGCTCTCTCCAACTCCGTGGGTTATTCTTCTTTGTCGTTCTTGACTTCCTCTAGGGCCCTCCGCAGGAGTGAAGTTTTCAAAATTAAAAGGGCTGACATTACGTCCCCAAATATTACCTTGTTCAATGATCTATTTCGGTGTCAACAAAGTTCACTTTTCAACTCTCATTCTCAAGTTGAAGCTTATAAATTTAATGACAATGGAAGGATATTTCTCTCAAATGAACACGAGTGGTCCAGAGCGACTCTGCAGATTAAGAAAGCACGCTTGGATAAATCTAGAAGTGGGGTCAAAAATGTCAAGGGGAGGCCAGTGGATAAAGAAGACTGCAGTGACCATATGAAGTTAAATTGTGATGAAAACAATCAAATTTCAAATGTTTTAGCAAATTCTGGAGGTTTTTATAGTAATTCTTTTGCATGTTCTGATCAAACAAGTACTTTATCTAATAGGTCACAATATGAATCCTCTATTGTGGAACACATAATGTGTGAAAAGGGGGAACCTGTAATGGTCGTGGGTACTAGATTTTATGATGATAGGAAAGCTTCAATCATGTCAACGCCTAGAATACATATTAAAGGGAAAGATTATATGCAGTCTAATAGTAGACAGAGGAATGAGTCTGCTTCTTCTTCAACAACCTATGATACTCGTACTCCAGTTAATAGTGGGAACAACAATGCAATGTTGAAAAAACTGAATGGCCGACCGGTTATTGGTTCAAGGAAGTTGGGCGCATATGATACACACAGTGTCGAAAAGGGTGCTCAATCATCATCTCAATATAACCTGCTGGAAGAGGATAAGTCGGCTGCCAAATTCATAGAAGCTGCTGATGTATTGAATAGGAACATTGCAAATGAAAATACTTCTGAAATCACTGCCACCTTTAAAGATGATGCTAAAATCACAAATCTTTTTGGTGATGGTAAGATAGATATTCAGGAGAGGCTTAATAGTATTTATGACAAGGTTTTGGTCGTTAATAGTATATCAAGAGCCAGGGAAGTTGTTTTGATGCTTACTAATCAGTACAGGCATCTAGTCCATGCTTGTGATACTGAGGTGGCCAAGATTGATGTGAAACAAGAAACACCTGTTGACCATGGTGAAATAATATGCTTCAGCATTTATTCAGGACTAGAAGCAGATTTTGGAAATGGGAAATCTTGTATCTGGGTAGACATTCTTGATGGTGGTGGTAGTGAACTTTTGCTTGAGTTTGCCCCTTTTTTTGAGGACTCTTCAATAAAAAAGATCTGGCACAATTACAGCTTTGATAATCATGTTATTGAAAACTATGGGATTAAGCTCTCTGGTTTTCATGCGGACACAATGCACATGGCTCGGTTGTGGGATTCATCTAGGCGAGCAAATGGTGGCTATTCTCTTGAAGCTCTTAGCAGTGATCAAAGAGTCATGTCTGGGGCACAATTGTGTCGTGAAAAAGAGTTGTTTGGTAAAGTTTCAATGAAAACCATCTTTGGCAAGAAAAAGACAAAGAAAGATGGATCTGAAGGAAAAATTGTAGTGATTGCTCCTGTTGAGGAGCTGCAACGAGAAGAGCGGAAATCATGGGTGTGCTACTCTGCATTAGATGCAATATGCACACTGAAGCTGTACGAAAGCTTAAGAAACCAATTATCTTGTATGGCATGGGAAGTTGATGGGTACAGAATATTGAGAAAATCCATGTTTGATTTTTATGAGAAATATTGGCAACCATTTGGGGAGCTGCTTGTCAAAATGGAAATGGAAGGAATGCTTGTTGATCGGGGATATCTTGCTGAGATAGAGAAGTTGGCCAAAGCTGAACAAGTAGTTGCTGCTAACAGATTCCGAAATTGGGCCTCAAGGTATTGTCCTGATGCCAAATACATGAATGTGGGAAGTGATGCGCAAGTGCGTCAACTCCTTTTTGGTGGAGCTGCAAACAGTAAGAACCCTAATGAGTTTGTTCAATGCGAAAAATCATTCAAAGTACCAAACACAGAGAAAGTGATAAAGGAAGGCAAGAAAAGCCCCACTAAATTTCGGAATATTACACTGACAAGCATTAAGGTTCCTTTGCCAACTGAAATTTACACACCTACTGGTTGGCCATCAGTGAGTGGAGATGCTCTGAAGATACTAGCTGGAAAGGTCTCTTCACAATTTGATTTTGTGGATGATGCTTTTGAAAATGATGAGGAGATTGAAAATGCTAAAGCAATAGGTCATAAAGTTTCAGAGGATGAAACATCAACCAGTCCAGAGTGTGTCGATTCTGATTATGGAACAGCTTTTGCAGCATTTAGAGTAAAAGAAGAGGGAAGGGAGGCTTGCCATGCAATAGCTGCCTTGTGTGGAGTTTGCTCCATAGACTCTTTGATTTCCAATTTTATTCTTCCCTTGCAGGGAAGTAATATATGTGGCAAGAATGGACGTATCCATTGTTCGCTGAATATCAACACTGAAACTGGTAGATTGTCAGCGAGGAAGCCAAATTTGCAGAATCAGCCAGCTTTGGAGAAGGATCGTTATAAGATCCGACAGGCATTTATTTCCGCCCCTGGAAATTCTCTTATTGTCGCCGATTACGGACAACTGGAACTTAGGATACTTGCTCATCTTGCCAATTGCAAGAGCATGCTTGATGCCTTTAAAGCTGGTGGAGACTTTCATTCTAGGACGGCTATGAATATGTACCCACATATTCGTGAAGCAGTTGATAAAGGAAAAGTGCTTCTTGAATGGGATCCACAACCTGGTGAAGGTAAACCTCCGGTCCCATTATTGAAGGATGCATTTGCTTCTGAAAGAAGAAAGGCTAAAATGCTTAACTTCTCGATTGCATATGGCAAAACACCTGTTGGTCTTGCTCGAGATTGGAAGGTTTCTGTGGAGGAAGCAAAGGAGACAGTTGATCTATGGTATAGAGAAAGAAAAGAGGTTCGTACTTGGCAAGAAGCTCGTAAGAAAGAAGCTCTGAGAAACGGATGTGTTCACACATTGCTAGGACGTGCACGGCAGTTTCCTTCATTGGAAAGTGCTACTCGCGCCCAAAAAGGGCATATTGAAAGAGCTGCTATAAATACTCCAGTTCAGGGCAGTGCTGCTGATGTTGCCATGTGTGCTATGTTAGAAATATCTCGAAATCTTCGCTTAAGGGAACTGGGATGGAAGCTTCTGCTACAGCAGGTTCATGATGAAGTGATCTTGGAAGGACCGAGTGAGTCAAAAGAGGTTGCCAAGGCCATTGTCATTGAATGTATGTCTAAGCCCTTCAATGGAGAGAACTTTCTCAAAGTTGATCTAGCCGTGGACGCCAAATGCGCACAAAATTGGTACGCTGCCAAATAG 4572 41.58 MSCFPCCISQERSNRKSLKKSIKEYRDAKNLASIANISFKSDGSKRRYINEEIKKIGQGNISAQILSFQELCTATENFNPGNLIGEGGFGRVYKGHIGGSKQAVAVKQLDRNGFQGNREFLVEVVMLSLLHHPNLVNLVGYCTDGEQRILVYEYMSNGSLEDHLLDLAPNKSPLDWKTRMKIAEGAAKGLEYLHETADPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPTGGKTHVSTRVMGTYGYCAPEYALTGQLTTKSDVYSFGVVFLEIITGKRVIDNARPIEEQNLVTWAQPLFKDRRKFTLMADPMLEGNYPVKGLYQALAVAAMCLQEEASTRPLISDVVTALEFLATDKNQEAKTAPPASNCGSKLSRVVEVMAMGFSSSQTTPLRPFWPSCFLIYRSGALSNSVGYSSLSFLTSSRALRRSEVFKIKRADITSPNITLFNDLFRCQQSSLFNSHSQVEAYKFNDNGRIFLSNEHEWSRATLQIKKARLDKSRSGVKNVKGRPVDKEDCSDHMKLNCDENNQISNVLANSGGFYSNSFACSDQTSTLSNRSQYESSIVEHIMCEKGEPVMVVGTRFYDDRKASIMSTPRIHIKGKDYMQSNSRQRNESASSSTTYDTRTPVNSGNNNAMLKKLNGRPVIGSRKLGAYDTHSVEKGAQSSSQYNLLEEDKSAAKFIEAADVLNRNIANENTSEITATFKDDAKITNLFGDGKIDIQERLNSIYDKVLVVNSISRAREVVLMLTNQYRHLVHACDTEVAKIDVKQETPVDHGEIICFSIYSGLEADFGNGKSCIWVDILDGGGSELLLEFAPFFEDSSIKKIWHNYSFDNHVIENYGIKLSGFHADTMHMARLWDSSRRANGGYSLEALSSDQRVMSGAQLCREKELFGKVSMKTIFGKKKTKKDGSEGKIVVIAPVEELQREERKSWVCYSALDAICTLKLYESLRNQLSCMAWEVDGYRILRKSMFDFYEKYWQPFGELLVKMEMEGMLVDRGYLAEIEKLAKAEQVVAANRFRNWASRYCPDAKYMNVGSDAQVRQLLFGGAANSKNPNEFVQCEKSFKVPNTEKVIKEGKKSPTKFRNITLTSIKVPLPTEIYTPTGWPSVSGDALKILAGKVSSQFDFVDDAFENDEEIENAKAIGHKVSEDETSTSPECVDSDYGTAFAAFRVKEEGREACHAIAALCGVCSIDSLISNFILPLQGSNICGKNGRIHCSLNINTETGRLSARKPNLQNQPALEKDRYKIRQAFISAPGNSLIVADYGQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMYPHIREAVDKGKVLLEWDPQPGEGKPPVPLLKDAFASERRKAKMLNFSIAYGKTPVGLARDWKVSVEEAKETVDLWYRERKEVRTWQEARKKEALRNGCVHTLLGRARQFPSLESATRAQKGHIERAAINTPVQGSAADVAMCAMLEISRNLRLRELGWKLLLQQVHDEVILEGPSESKEVAKAIVIECMSKPFNGENFLKVDLAVDAKCAQNWYAAK 1523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1270733 1283699 + Bpe023852.1 Bpe09g00183 108583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00183 1523 MobiDBLite consensus disorder prediction 607 640 - -
Bpe09g00183 1523 Coils Coil 8 28 - -
Bpe09g00183 1523 Gene3D - 1273 1442 - -
Bpe09g00183 1523 Gene3D - 737 994 IPR036397 GO:0003676
Bpe09g00183 1523 PANTHER DNA POLYMERASE I A, CHLOROPLASTIC/MITOCHONDRIAL 724 1523 - -
Bpe09g00183 1523 CDD DNA_pol_A_plastid_like 1109 1521 - -
Bpe09g00183 1523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Bpe09g00183 1523 Gene3D Transferase(Phosphotransferase) domain 1 155 373 - -
Bpe09g00183 1523 Gene3D Phosphorylase Kinase; domain 1 39 154 - -
Bpe09g00183 1523 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Bpe09g00183 1523 Pfam DNA polymerase family A 1197 1520 IPR001098 GO:0003677|GO:0003887|GO:0006260
Bpe09g00183 1523 SUPERFAMILY DNA/RNA polymerases 975 1523 IPR043502 -
Bpe09g00183 1523 CDD STKc_IRAK 84 353 - -
Bpe09g00183 1523 SUPERFAMILY Ribonuclease H-like 745 958 IPR012337 -
Bpe09g00183 1523 CDD DNA_polA_I_Ecoli_like_exo 755 992 - -
Bpe09g00183 1523 MobiDBLite consensus disorder prediction 605 641 - -
Bpe09g00183 1523 Pfam 3'-5' exonuclease 815 958 IPR002562 GO:0003676|GO:0006139|GO:0008408
Bpe09g00183 1523 PRINTS DNA-polymerase family A (pol I) signature 1219 1241 IPR002298 GO:0003887|GO:0006261
Bpe09g00183 1523 PRINTS DNA-polymerase family A (pol I) signature 1242 1257 IPR002298 GO:0003887|GO:0006261
Bpe09g00183 1523 PRINTS DNA-polymerase family A (pol I) signature 1264 1287 IPR002298 GO:0003887|GO:0006261
Bpe09g00183 1523 PRINTS DNA-polymerase family A (pol I) signature 1294 1307 IPR002298 GO:0003887|GO:0006261
Bpe09g00183 1523 PRINTS DNA-polymerase family A (pol I) signature 1435 1451 IPR002298 GO:0003887|GO:0006261
Bpe09g00183 1523 PRINTS DNA-polymerase family A (pol I) signature 1466 1479 IPR002298 GO:0003887|GO:0006261
Bpe09g00183 1523 SUPERFAMILY Protein kinase-like (PK-like) 61 355 IPR011009 -
Bpe09g00183 1523 Gene3D - 1228 1519 - -
Bpe09g00183 1523 Pfam Protein kinase domain 81 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00183 1523 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00183 1523 SMART polaultra3 1252 1483 IPR001098 GO:0003677|GO:0003887|GO:0006260
Bpe09g00183 1523 PANTHER DNA POLYMERASE I 724 1523 IPR002298 GO:0003887|GO:0006261
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00797 Bpe09g00183 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00183 Bpe-Chr9:1270733 Bpe04g00871 Bpe-Chr4:5800940 1.30E-163 dispersed
Bpe02g01197 Bpe-Chr2:15662450 Bpe09g00183 Bpe-Chr9:1270733 3.46E-17 transposed
Bpe12g00262 Bpe-Chr12:2483157 Bpe09g00183 Bpe-Chr9:1270733 7.30E-104 transposed
Bpe03g00797 Bpe-Chr3:27918991 Bpe09g00183 Bpe-Chr9:1270733 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63501 PF00476 DNA_pol_A 6.40E-72 No_clan Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00183 K02335 - zju:107432257 1318.91