Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00195 ATGGTTTCGCCGGAAAACACCAATTGGCTCTTTGATTACGGATTGATCGACGATATTCCGGTCACGGATTCTACTTTCCCTGTCGCGAATTCCGGTTTCTCTTGGCCTGTGACGGCTCTCAATGGCTCCTCCAGTGTCAGTTTGGAAATTGATGGATCATTGGGAGAACAAGATGGACTGAAGGAATCTGGCTCAAAAAAGAGAGTTAGAACTGAATCCAATTGTGCAACTAGCTCCAAGGCATGTAGGGAGAAGTTGCGCAGGGACAGGCTGAACGACAAAGTTCTTTTAATGAAATTTTTCTATAGGTTTCTGGAATTGGGTGCTATATTGGAGCCTGGAAGGCCACCCAAAACAGATAAGGCTGCTATATTGAACGATGCCATTCGAATGGTCGAGAAAAATGAGCTTCGAGATGAGAAACAGAGGTTAAAGGGAGAGAAAGAGAAGCTGGAGCAACAAATGAAATCCTTGACTACAACCCCAAGTTTCTTGTCTGCCCCTCCTGCAATTCCAGCTGCATTTGCTGCTCCTGGCCAAGTTCCAGGAAATAAGTTGGTGCCATTCATCAGCTATCCAGGAGTTGCCATGTGGCAGTTCATGCCACCAACTTCAGTCGACACATCACAGGATCACGTCCTCCGACCTCCAGTCGCTTAA 660 46.67 MVSPENTNWLFDYGLIDDIPVTDSTFPVANSGFSWPVTALNGSSSVSLEIDGSLGEQDGLKESGSKKRVRTESNCATSSKACREKLRRDRLNDKVLLMKFFYRFLELGAILEPGRPPKTDKAAILNDAIRMVEKNELRDEKQRLKGEKEKLEQQMKSLTTTPSFLSAPPAIPAAFAAPGQVPGNKLVPFISYPGVAMWQFMPPTSVDTSQDHVLRPPVA 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1381713 1383459 - Bpe023862.1 Bpe09g00195 108595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00195 219 CDD bHLH_AtILR3_like 80 160 - -
Bpe09g00195 219 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 132 219 - -
Bpe09g00195 219 Gene3D - 78 165 IPR036638 GO:0046983
Bpe09g00195 219 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 1 133 - -
Bpe09g00195 219 Coils Coil 130 161 - -
Bpe09g00195 219 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 79 165 IPR036638 GO:0046983
Bpe09g00195 219 PANTHER BHLH TRANSCRIPTION FACTOR 132 219 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Bpe09g00195 219 PANTHER BHLH TRANSCRIPTION FACTOR 1 133 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe09g00195 Bpe11g00524 CCT
Bpe03g00805 Bpe09g00195 CCT
Bpe03g00805 Bpe09g00195 ECH
Bpe09g00195 Bpe11g00524 ECH
Bpe08g01142 Bpe09g00195 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00195 Bpe-Chr9:1381713 Bpe14g00694 Bpe-Chr14:5450124 1.13E-42 dispersed
Bpe11g00524 Bpe-Chr11:4073329 Bpe09g00195 Bpe-Chr9:1381713 2.18E-96 wgd
Bpe03g00805 Bpe-Chr3:27979792 Bpe09g00195 Bpe-Chr9:1381713 1.27E-47 wgd
Bpe08g01142 Bpe-Chr8:13277068 Bpe09g00195 Bpe-Chr9:1381713 4.92E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00195 - - pper:18778871 320.857