Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00200 ATGCCAACAGTTTGGTTTTCTCTGAAGAAGTCTCTGCATTGCAAATCAGAGCCGTCTGATGTCCACGACCCAAAATCAATCAGACATTTGAGTTCAATTTTGACCAAAAAAACAAGTAGAACGGGCTGTTCAGCAGGAAGATCAGGCTGTTCAAGGTCAATAGCAAATCTCAAAGATGTAATCCATGGCAGCAAAAGGCATCTAGAACGGCCACCAAGCTGTAGCCCAAGATCTATAGGAAGTAGTGAGTTTCTAAACCCAATCACTCACGAAGTAATTCTGAGTAACTCGAAATGCGAGCTCAAAATCACTGGCTATGGAGGTTTTCAAGATGGGTTTGGTAGTTCAGGCGGGACTGAAGCTCATAACAATGGCGGCTCCACTTTTGTGGGTACCTTAAGACCGGGTACACCTGGGCCTGGAGGGTACCCTACGATGCACTATTTTAACCCTTCTTTTAGAACTTCGTCTACTTCTTCAAGGAAACACCCTTTTCTTGGATCAGAGAGTTGCAGAGAAGGGTCTGGCTATGGAGTTTCTGCAAAATCTGGGGGTGGAGCTGGAGTTTACTCAACCAATAGGGTCTCTTTTGATGTAGATTCTGCTGTTAATGGCTCCTGTACAATCACTTGTCACAAATGTGGAGAGCAGTTTTGCAAAGGAGAAGCTGCTGAAGCTCACCATCTCTCTAAACATGCTGTGACCGAACTAATGGAAGGCGATTCGTCTCGGAAAATAGTCGAGATTATATGCAGATCGAGCTGGCTGAAATCTGAGAACCAATGCGGGAAGATAGAAAGAGTTTTGAAAGTTCACAACATGCAAAGAACACTCGCCCGATTCGAGGAGTATCGAGAAACCGTGAAGGCAAGAGCCAGTAAACTCCTGAAAAAGCACCCTCGGTGCCTGGCCGACGGCAATGAGCTGTTGAGATTTTACGGCACGACCGTGGCCTGTTCTCTCGGCCAGAGTGGCTCTTCGAGCCTTTGCGGGACTGGAAAATGCAGTGTTTGCAGGATTATACGAAATGGGTTCCCGGCGAATATGGAGTTGAAGGAAGGAGTTGGCGTATTTACGACTTCGACGAGTGCGAGAGCATTCGAATCAATCCAAATCGAGGAAGATGATGCGATGACGATGAGAAAAGCATTGATAGTTTGTAGGGTGATTGCAGGGAGAGTGCATAGACCTTTGGAGAACATTCAAGAAATGGCTGGGCTTGTAGGGTTTGATTCATTGGCTGGAAAAGTTGGTCTATATTCCAACATTGAAGAGCTGTATTTGCTAAGCCCCAAAGCTCTCCTTCCTTGCTTTGTTGTGATTTGCAAATCTTGA 1335 45.84 MPTVWFSLKKSLHCKSEPSDVHDPKSIRHLSSILTKKTSRTGCSAGRSGCSRSIANLKDVIHGSKRHLERPPSCSPRSIGSSEFLNPITHEVILSNSKCELKITGYGGFQDGFGSSGGTEAHNNGGSTFVGTLRPGTPGPGGYPTMHYFNPSFRTSSTSSRKHPFLGSESCREGSGYGVSAKSGGGAGVYSTNRVSFDVDSAVNGSCTITCHKCGEQFCKGEAAEAHHLSKHAVTELMEGDSSRKIVEIICRSSWLKSENQCGKIERVLKVHNMQRTLARFEEYRETVKARASKLLKKHPRCLADGNELLRFYGTTVACSLGQSGSSSLCGTGKCSVCRIIRNGFPANMELKEGVGVFTTSTSARAFESIQIEEDDAMTMRKALIVCRVIAGRVHRPLENIQEMAGLVGFDSLAGKVGLYSNIEELYLLSPKALLPCFVVICKS 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1397029 1398471 + Bpe023866.1 Bpe09g00200 108600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00200 444 MobiDBLite consensus disorder prediction 117 131 - -
Bpe09g00200 444 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 444 - -
Bpe09g00200 444 MobiDBLite consensus disorder prediction 117 137 - -
Bpe09g00200 444 ProSitePatterns Zinc finger C2H2 type domain signature. 211 232 IPR013087 -
Bpe09g00200 444 SUPERFAMILY ADP-ribosylation 234 443 - -
Bpe09g00200 444 Gene3D - 224 444 - -
Bpe09g00200 444 PANTHER - 2 444 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe09g00200 Bpe11g00520 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01394 Bpe-Chr8:14887511 Bpe09g00200 Bpe-Chr9:1397029 1.26E-51 dispersed
Bpe09g00200 Bpe-Chr9:1397029 Bpe11g00729 Bpe-Chr11:5568109 3.53E-60 dispersed
Bpe11g00520 Bpe-Chr11:4051556 Bpe09g00200 Bpe-Chr9:1397029 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00200 - - gmx:100787790 645.195