Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00240 ATGGGTCTGAAAGGAATTATTTCTCCTTCTTTAGGCCGATTAGATCAGCTAAAACAGATCGATCTTTCACATAACGATCTTGAAGGTGGTTTACCCAAAGAGCTCTCAAACTTAAGTCATCTTCAAGTTCTTGATTTGAGCCATAATTTGCTCCCAGGACCTGTTTCAGCCGCTCTTTCCGGATTGGTATCGCTTCAAGTTTTGAATATCTCGAGTAATATGTTTAATGGGGAAATTTCTGAGCTCAAAGGATTTCATCATCTTGTTATATTCAATATAAGCTACAACTCTTTCACTGGCCCGTTCAATTCTCAAATTTGCAATACTTCTGATGGGATTCAAGTTCTTGATATTGCAGTTAACCGATTCTCGGGTACTTTGGAAGGTTTGAACTACTGTAGCTCATCTCTCAAACAATTTCATGCAGATTATAATCTCTTTGGAGGTCGTTTTCCAGAATCTTTTTATTCGTTGATCAGTTTGGAGCGTCTTTCACTTTCCGGTAACAACTTTTCCGGCCATTTGAGCGAAGAATTGAGTAAGCTCTCGAGCCTTAAATCCCTTGTTATTTTTGGAAATCAACTTTCTGGTGAACTTCCCAATGTTTTTGGGAATCTGACTGAGTTAGAAGAGTTAACTGCTCATTCAAATTTGTTTTCTGGGCAATTGCCTTCAACCCTCTCACTTTGCTCGAAGCTTGGAGTGCTTGATCTTAGAAACAATTCTTTTAGTGGAGATATTGGGCTTAATTTTACTGGACTTCTTAATCTTCATACACTGGATCTTGCCTCTAATCGCTTTTATGGCGCTCTTCCTAATTCTCTCTCGGATTGCCGGGAATTGAAAATTTTAAGTCTTGCCAGAAACGAATTTACAGGCCGAATTCCGGAAAATTATGCAAAGCTTTCCTTTCTATGGTTTCTCTCCTTGTCTAACAACAGCTTGGTGAGCTTAGGTGGGGCATTGTCTGTGCTACAGCACTGTAGAAATCTTTCAACTCTTATTCTTACAGAGAATTTCCATGGTGAAGAAATTCCAAAAAGTAATTCTAGATTTGAGAATTTGAGCATTTTGGCTCTCGGAAATTGTGGTCTTAAGGGTCAGATTCCAGTTTGGTTATTGAATTGCCAGAGGTTAAGTGTTCTTGATTTGTCTTGGAATCGATTGACGGGAAGCATACCTCCGTGGATCGGACAGATGGAGAGTTTATTTTACATGGATTTTTCGAACAATTCTCTTACCGGAGAGATCCCAATAAGTTTGGTCAAGATGAAGACACTCACTCTTGGAGGATGCAGTTTTTTGAATCCAGCATCGTCCGGCATACCTTTATACGTAAAGCGTAATCAGAGTTCTACTGGTTTGCCGTATAATCAAGTATCGAGTTTTCCACCATCGATTTACTTGAGCAGCAATGCACTAAATGGGACAATTTGGCTTGAAATCGGGCAACTAAAGCAGCTGCATGTTTTGGATTTGAGCCATAATGGCATTTCGGGAACAATCCCTTGGTCGATATCGGAGATGGAGAATCTAGAAGTGTTGGATTTATCGAACAACAATCTTTCCGGAAGAATCCCTCCATCATTTAACAAGCTTACATTTCTGTCGAGGTTTAGTGTGGCATATAATCACTTGGAGGGAGAAATTCCGACCGGAGGACAATTCTTAAGCTTTTCGGCGTCAAGCTTCGAGGGTAATCCTGGACTTTGCGGCAAAATATTTTCTCCGTGTGAGGAAGTAGATGGAATTGGAAGGAATCCAAAACGAGTTGCTGATTCCAACTCCATATTTAGTGGTAGAAGCATCATTTGCATAACATTTATAGCAGGAATAGGAATTGCTTTGCTTCTGACAATTATTTGGCTCAAGACGTCAAGGAAGAGTGCAAAATTTCCGATAGAGGATTTCACGGAGGAACTAGGGCGACCCCCCCGATTATCCGAAGCTCACTGTTCATCAAAGTTGGTGCTTTTTCAGAATTCGAAGTGTAAAGATCTTTCAATTGCAGGCTTGTTAAGAGCAACAAATAACTTCAGCCAAGCAAACATAATTGGCTGCGGAGGATTTGGTCTAGTTTATAAAGCCAACCTCTCTGATGGTACAAAAGTTGCCGTCAAGAGACTTTCGGGCGATTGTGGTCAGATGGAACGGGAATTCCAGGCCGAAGTTGAAGCTTTGTCTCGAGCTCAACACAAGAATCTTGTTTCTCTTCAAGGGTATTGCCAAAATGGAAATGATAGACTATTGATATATTCCTTCATGGAAAACGGAAGCTTGGACTATTGGCTTCATGAGAATATCGACGACGGCTCGTCTCTGAACTGGGAAACTCGGTTTAGAATCGCGCAGGGCTCTGCCCGTGGATTAGCTTACTTGCATAAGGAATGCGAGCCAAACATAATTCACAGAGACGTGAAATCGAGCAATATATTATTAGATGAAAACTTCAATGCCCATTTGGCCGATTTTGGTCTTTCTCGTCTTCTTCGTCCTTATGATACGCATGTTACGACCGATTTGGTTGGGACTTTGGGTTATATTCCTCCAGAGTATAGTCAGACTCTAACTGCAACTTTCAGGGGCGATGTTTATAGTTTTGGTGTTGTTCTTCTCGAGCTTTTGACGGGTCGGCGGCCCGTGGAAGTATGCAAAGGGAAAAATTGTCGAGATTTGGTGTCATGGGTGATGGATATGAAAGCCGAGAAGAGGGAGAAAGAGGTTATTAGTTCTGACATATGGGACCAAGACCATGAGAGGCAGCTCTTAATGGTGCTTGGTATTGCTTGTAAATGCATTGAGATGGATCCAAGGAGGAGACCTTCCATTGAAGAAGTTGTTTCTTGGCTTGATAGTGTTGAATTTCAGGCTTCCCAGCCGTGA 2883 41.42 MGLKGIISPSLGRLDQLKQIDLSHNDLEGGLPKELSNLSHLQVLDLSHNLLPGPVSAALSGLVSLQVLNISSNMFNGEISELKGFHHLVIFNISYNSFTGPFNSQICNTSDGIQVLDIAVNRFSGTLEGLNYCSSSLKQFHADYNLFGGRFPESFYSLISLERLSLSGNNFSGHLSEELSKLSSLKSLVIFGNQLSGELPNVFGNLTELEELTAHSNLFSGQLPSTLSLCSKLGVLDLRNNSFSGDIGLNFTGLLNLHTLDLASNRFYGALPNSLSDCRELKILSLARNEFTGRIPENYAKLSFLWFLSLSNNSLVSLGGALSVLQHCRNLSTLILTENFHGEEIPKSNSRFENLSILALGNCGLKGQIPVWLLNCQRLSVLDLSWNRLTGSIPPWIGQMESLFYMDFSNNSLTGEIPISLVKMKTLTLGGCSFLNPASSGIPLYVKRNQSSTGLPYNQVSSFPPSIYLSSNALNGTIWLEIGQLKQLHVLDLSHNGISGTIPWSISEMENLEVLDLSNNNLSGRIPPSFNKLTFLSRFSVAYNHLEGEIPTGGQFLSFSASSFEGNPGLCGKIFSPCEEVDGIGRNPKRVADSNSIFSGRSIICITFIAGIGIALLLTIIWLKTSRKSAKFPIEDFTEELGRPPRLSEAHCSSKLVLFQNSKCKDLSIAGLLRATNNFSQANIIGCGGFGLVYKANLSDGTKVAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCQNGNDRLLIYSFMENGSLDYWLHENIDDGSSLNWETRFRIAQGSARGLAYLHKECEPNIIHRDVKSSNILLDENFNAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTGRRPVEVCKGKNCRDLVSWVMDMKAEKREKEVISSDIWDQDHERQLLMVLGIACKCIEMDPRRRPSIEEVVSWLDSVEFQASQP 960
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1740675 1743557 + Bpe023910.1 Bpe09g00240 108640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00240 960 Gene3D Transferase(Phosphotransferase) domain 1 755 958 - -
Bpe09g00240 960 Pfam Protein kinase domain 680 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00240 960 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 65 174 - -
Bpe09g00240 960 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 357 417 - -
Bpe09g00240 960 PANTHER PHYTOSULFOKINE RECEPTOR 2 65 174 - -
Bpe09g00240 960 PANTHER PHYTOSULFOKINE RECEPTOR 2 357 417 - -
Bpe09g00240 960 PANTHER PHYTOSULFOKINE RECEPTOR 2 522 953 - -
Bpe09g00240 960 PANTHER PHYTOSULFOKINE RECEPTOR 2 467 526 - -
Bpe09g00240 960 Gene3D Ribonuclease Inhibitor 62 317 IPR032675 -
Bpe09g00240 960 Gene3D Phosphorylase Kinase; domain 1 645 754 - -
Bpe09g00240 960 Pfam Leucine Rich Repeat 379 397 IPR001611 GO:0005515
Bpe09g00240 960 ProSitePatterns Protein kinases ATP-binding region signature. 685 707 IPR017441 GO:0005524
Bpe09g00240 960 ProSiteProfiles Protein kinase domain profile. 679 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00240 960 ProSiteProfiles Leucine-rich repeat profile. 511 533 IPR001611 GO:0005515
Bpe09g00240 960 PANTHER PHYTOSULFOKINE RECEPTOR 2 1 68 - -
Bpe09g00240 960 PANTHER PHYTOSULFOKINE RECEPTOR 2 186 345 - -
Bpe09g00240 960 SUPERFAMILY L domain-like 148 557 - -
Bpe09g00240 960 CDD STKc_IRAK 685 951 - -
Bpe09g00240 960 SMART LRR_sd22_2 158 181 - -
Bpe09g00240 960 SMART LRR_sd22_2 485 514 - -
Bpe09g00240 960 SMART LRR_sd22_2 14 40 - -
Bpe09g00240 960 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 68 - -
Bpe09g00240 960 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 522 953 - -
Bpe09g00240 960 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 467 526 - -
Bpe09g00240 960 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 186 345 - -
Bpe09g00240 960 SUPERFAMILY RNI-like 3 224 - -
Bpe09g00240 960 Gene3D Ribonuclease Inhibitor 467 578 IPR032675 -
Bpe09g00240 960 SMART serkin_6 679 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00240 960 SMART LRR_typ_2 206 230 IPR003591 -
Bpe09g00240 960 SMART LRR_typ_2 254 278 IPR003591 -
Bpe09g00240 960 SMART LRR_typ_2 302 325 IPR003591 -
Bpe09g00240 960 SMART LRR_typ_2 38 61 IPR003591 -
Bpe09g00240 960 SMART LRR_typ_2 158 181 IPR003591 -
Bpe09g00240 960 SMART LRR_typ_2 509 532 IPR003591 -
Bpe09g00240 960 SMART LRR_typ_2 182 205 IPR003591 -
Bpe09g00240 960 SMART LRR_typ_2 376 400 IPR003591 -
Bpe09g00240 960 PRINTS Leucine-rich repeat signature 509 522 - -
Bpe09g00240 960 PRINTS Leucine-rich repeat signature 379 392 - -
Bpe09g00240 960 SUPERFAMILY Protein kinase-like (PK-like) 662 950 IPR011009 -
Bpe09g00240 960 Gene3D Ribonuclease Inhibitor 318 440 IPR032675 -
Bpe09g00240 960 Gene3D Ribonuclease Inhibitor 1 61 IPR032675 -
Bpe09g00240 960 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Bpe09g00240 960 Pfam Leucine rich repeat 487 546 IPR001611 GO:0005515
Bpe09g00240 960 Pfam Leucine rich repeat 16 74 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00973 Bpe-Chr8:12154906 Bpe09g00240 Bpe-Chr9:1740675 2.73E-82 dispersed
Bpe09g00240 Bpe-Chr9:1740675 Bpe11g01618 Bpe-Chr11:12318423 1.09E-06 dispersed
Bpe09g00240 Bpe-Chr9:1740675 Bpe10g00974 Bpe-Chr10:15211628 4.34E-11 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63502 PF00069 Pkinase 2.40E-45 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00240 - - pdul:117625018 1319.68