Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00245 ATTTTCGTGATTATTGTCATGCGATTGTCATCTGTGGCCTCGAAGAAAAGAGGTGATCGGTCTGGCTCAAAGGTTCGAAAGAAGCACAAGAGGCTTGACGCCATATGTGAGAAAGAGTATACTCGGAATCATGTTGATTTGAAAGAGGAGAGGGAAGTGGTAGGGAGTGCAAGTGTGGAATTGGAACCTAGACGTAGCTCCAGGGTTCGTCGGGCTCCTGTTTTGCTTGATGTCTCCCCACCACCATCAAAGAAGCGGAAGAAGCTTCACAGGAATGTGGTAGTAAAAGTTGAGGAGATTTCTGAGACTCTGCCGCTTGCAAGTGACAACTTGAAGGACTTTGAGACGTCAGACAGCTTGAAATCTAGGTTGAGATCAAGAACAAGAAACACAGGATTGGTGTTGGGTGAGTTTAGAGGTTTGCAAAGCCCGAAGAAGAAGCTTTTTGTCAAAATTAATGAAGTTGTTGATGAAGGGAATGCAATGGTGGTAGAGGATGAAACAAAGCAATCAGAAGATGGGAAGCCTATGGTTCTTAAGTCAAACCAACCAGGGAAGATTAAGGCGATGAACTCGTCAGAGAAAGGAGAAAAGAAAAACAAGTTATTTAAAAACAAAGATGAGAGTGGGAGGGAAATAATGGAGGCAATGGTCAATGACTGTGAGGGGGATCCTTTATTTGGAAAGGAGAGGGAAGGAACAGTGGTAATTGGCAACCAACGTGAAGAGACGGATACACTCTTCAGAAGTGAATTGTCTGTGAGTGATAAAATGGAACAAATGAATGGTAATCTTAAACCTGTAGATGAGAATGTGGATAAAGAAATTTCAAGGGCTCTGCTCTCAGAGAACCTCAATCACGTTGATGAAAATTTGGAAGAAGGGGATTATATAAAGGCAGTGGAACACAGGGAGAATGAAGTGGAAGAATTACAACGTGTGAATGGAGTTGAGAATGAGGTAGAAGATGAAAAAAATGGTGAATTTTTGACTAAAGGGCTGGCAGATGAAGGATATTGTCATGATGTGGTTGTTGATTTGGGCAATGGTACACAAATTTTAAATGTTGAAAGTGCTTCGAATGCAGAGAAGCTCATTCACTCTTCAGTTAATGTACCTAAAAAGCCTCGCATCAAAGAGGGCAGACGGTGCGGTCTATGTGGGGGAGGCACGGATGGTAAACCTCCCCAAAAATTAGCACATGATGCTGGGGACAGTGAGAGTGAGGCATATAGTGGCTCTTCACCTGCGGAGGAACCAAACTATGACTTATGGGATGGTTTTGGTGATGAACCTGGCTGGCTTGGACGGCTTTTAGGTCCTATAAATGATCGTTATGGTATTGCTGGAATATGGGTCCATCAACACTGTGCTGTATGGAGTCCAGAGGTGTATTTTGCTGGTTTGGGATGCTTAAAAAATGTGAGGGCAGCGCTTTGCAGAGGACGAGCCCTGAAGTGCACTCGCTGTGGACGTCCTGGGGCAACCATTGGATGCCGTGTTGATCGATGTCCAAAAACATATCATTTGCCTTGTGCTCGTGCTAACGGCTGCATCTTTGATCATCGTAAGTTTCTCATAGCCTGCACAGATCATCGACATTTCTTTCAACCACAATATTTAACTGATATGAAGAAAATAAAGATTAAGAAGATGAAGTTGGGCTTAAGGAAGCTGTTAAATGATGCCTTGCGGAAGGATATTGAAGCAGAGGAGAAGTGGTTAGAGAATTGTGGTGAGGATGAAGAGTTTTTGAAGAGAGAGAGCAAAAGGCTTCATCGGGATTTGGCAAGAATAGCACCAATGTACATTGGAGGCTCAGACTCGGAAGGAAAAAATATATTCGAGGGTTGGGAATCTGTCGCAGGGCTTGAAAATGTCATCCGCTGTATGAAGGAAGTTGTGATTTTACCACTTCTTTATCCTGAGTTTTTTGATGGACTTGGTATTACACCTCCCAGGGGTGTTCTTCTGCATGGGTATCCTGGAACTGGTAAAACTCTTGTTGTGCGAGCATTAATTGGTGCTTGTGCTCGCGGTGATCGGCGTATAGCATATTTTGCTCGAAAAGGTGCAGATTGTTTGGGAAAATATGTTGGTGATGCTGAACGCCAACTCAGACTGTTGTTTCAGGTAGCTGAGAGATGTCAGCCTTCAATTATTTTCTTTGATGAAATAGATGGGCTGGCACCTTGTCGCACAAAGCAGCAGGATCAAACTCACATTTCTGTCGTGTCAACATTGCTTGCTCTGCTAGATGGTTTGAAGTCCCGTGGTTCAGTTGTTGTGATAGGTGCAACAAATCGTCCTGAAGCTGTTGATCCAGCCTTAAGGCGCCCTGGCAGATTCGATAGAGAAATATACTTTCCTCTCCCATCAGTTGATGACCGAGCTGCTATTCTTGCACTTCACACTCAGATGTGGCCGAAGCCTGTGGCAGGAAATGTGCTCATGTGGGTTGCTCAAAAAACTGCAGGCTTTGCTGGTGCTGATCTTCAGGCTCTCTGTACGCAAGCAGCAATCACGGCACTGAAGAGGAGTTTCCCTTTGCATGAAATTTTGTCTGCAGCTGGAGAGAGAGGTTTGTGTGGTAAACGCACTCCCCTCCCTGCCTTCTACGTAGAGGAGAGAGATTGGCTAGAGGCTGTGTCAAAGGCCCCACCTCCTTGTTCACATAGAGAGTCAGGAATGGCTGCTAATGATATTGTCTCCTCGCCCCTTCCTGCACACCTTATTCCTTGTTTGCTTCTACCGTTGTCAACTTTGCTCGTTGCTCTTTATCTCGATGAACGTGTTTCCCTGCCACCTATGCTATCAAAAGCAGCAACAATGATAAAAGTTGTGATTGTTTCTGCACTGAATAAAAGAAACATGTCGAGTGAATACTGGTGGTGTCATGTTGATAATTTTCTCCATGAACCAGATATTGCAATAGAGATAGAGAGAAAGCTTGGAAGTTCTGGAGTTTTAGTAGGTGGTACTCAGTTTCCTAGGTGTGATGATTTTAATTGTGATGATGACATTGGTGATGATGATAGCACTCGAAGATTCAAACTTCCCTTAAAACATCATGGTGGCAGTTGTAAAAGTTTAGAACACATATCATTATCCTCAAAACATAAGTCAGGATTTCGCATTTTGATTGCTGGAAATCCCCAATCTGGCCAGAGACACTTGACATCTTGTCTTCTTCACTGCTTCGTTGGAAATATGCAAATTCATAAGGTTGACTTGGCTACTATTTCACAGGAAGGGCAAGGAGATGTGGTGTTAGGGATCACACTTCTGCTAAAGAAATGTGTCAGTGTTGGGTCATGCATGTTATTCATGCCTAGAATTGATCTTTGGGCCACCAATACACATTATCGAAGTACGGCGGAGAGTGAGTCTTGTTCAGAAGATGACCAGGCTTTTAAGAAAGAAAAATCTTCTGTCAACCTTGGTCAGGTGACTGGAGGAGAACACAAATTAACGCCAGGGGAAGAGCTCCATGATATTGTGCATATTGCTTCACAGGCCTGGATTTCTTTTGTGGATGAGGTGGATTCTTTGAGTCTCTCTACATCCTTCATAATTATGGCTACTTCAGAAATTCCATATCAGCTACTTCCTCAAAGAGTAAGGCAATTCTTTAAGAGTGATTTGTCAGACTGCAGTTTGTCAAATGCTTTGGAGCACACGGTACCAAGATTCTCAGTGCAGATTGATGAGAACTTCAACGCGACTAAGGTGATCAATCTATCTGCATCACAGCTAACTAGGGAACTGGTGCACTTACTCGTTCAATGGACTCACCAAAAAACTCACATCAATACAAAAGTCCAGGAGTATGAAACTCTCAACTCTGTTGAAGGCCGAGCGCATAATGTAGACAGTACCAAAAGTGAAATCAGTATTGATAACCGGGGTCTAACAAACAATCCTGGTGAATCTTCTATCAAAGATTCTCCACTTGCCTGTACCAGAACTATTAGGGGGAAATCGAGTGTGCTAGTAGCAATATCTTCATTTGGCTATCAAATTTTGAGATATCCTCATTTTGCTGAACTTTGTTGGGTGACATCAAAATTGAAGGAAGGCCCCTCTGCAGACATAAGGGGACCTTGGAAAGGATGGCCATTTAACTCGTGTATTGTTCGTCCTGCTAGCTCATTGGAAAAGGTGGGAATTGATAGTGACACTTTTGTTAAAGTCAAAGGAAAATCAAGTTTAGTAAGAGGTTTAATTGCAGTTGGGTTATCTGCTTACAGAGGTGCTTACACATCACTAAGAGAAGTCTCTTTAGAGGTGCGGAAGGTTTTTGATCACCTAATGGAACAAATTAATGAGAAAATTCAAGCAGGGAAAGATAGGTATCAGTTTGTTCGTCTTTTATCCCAAGTGGCTTATGTTGAAGATATGGTTAATGGCTGGGCTTACACGCTCCAGAGTTTGGAGCAGGACGCTCAGACTCCTAGAATAGCAATGAGCCAGAAGTTAATTGGGGTGAATTATCCAGAGAATATTCAAGTCTCCAGTGATAATCAGCTTCAGAGTGAGGAATGCGACCCTTCTAGAAAAGGTTCTCACGCAGCAGAAACTTTAGAAAATGGCGTATGTATTGAGATGACAAAAGTAGCTGGAGAATCTAGTACTTATTCCAATGGTATGATTGCAATTTCCGAAGATGATCAGTTGGAAAATTCAATCTTGAATGATTCCTCTAATGATCGATCAAGTCTCCATCATGGTGCAGAAGATCAATTTGTTGATCATATTCAAATTAAGCAAAATGGGAGATTATCTGGCTCAAATGAACAGGAAACCAATAGAAATAGTGCAGTAATTGATGCAGATTCTGAGTTGGTGCGACTTTCTAATAGTTCGAACTCTCATCCTACTAGTTTTGACGAATTTGTGGGTGGTAAGTTTTCGTGCTCTACAAAGGTTACTGAAATTGGTGAATTTGATGCTAAGCTTGACATTAATGATCATTCCACAGACCCTGGTCTGTCTGCGCGGACTGAGATTTTGTGTTCGTATCATTGTTGCACTGATTGTGTAAAAGTCATTCACAGCTTGACTACAAAAATTCTTGCCCGGGAATTCTTGAAGGAGGACAGCTGGACGATTGAGGATTTTCATGATGTTGTTTCGACCGTATCAGTGGAACTTCTTTCTGGTGTAAAAAGAGCACTTTCCGGCAAAGATAACACTTGGTTTGATGAAGAGAGTCAGAATTCAAGAATCAAAGCTTATGACACCTTATTTAAGGATTCACATTTGCAACCTTGCCGTTGCACCATTCCCAAAAATATCATTGGTGAGCATGCAGAATGTAGTGGGCACTCTAAACAAAGTGCAAGCACTGAAGCAAAATCCTGGCCAACCTCTCAATTTGGATCTGATTTTAAATTTATCTTCAGAGATGGTGTATTAGTAAGCTTAGATTCTGAGAAGGATGTCTCTTTTCTCTGTAAAGTGCAGAAGTTGTGCCTGTCTTCTCTTATAGAATTGATACTGAAAACCAAGAAGCCGTTTGGGTAA 5526 42.38 IFVIIVMRLSSVASKKRGDRSGSKVRKKHKRLDAICEKEYTRNHVDLKEEREVVGSASVELEPRRSSRVRRAPVLLDVSPPPSKKRKKLHRNVVVKVEEISETLPLASDNLKDFETSDSLKSRLRSRTRNTGLVLGEFRGLQSPKKKLFVKINEVVDEGNAMVVEDETKQSEDGKPMVLKSNQPGKIKAMNSSEKGEKKNKLFKNKDESGREIMEAMVNDCEGDPLFGKEREGTVVIGNQREETDTLFRSELSVSDKMEQMNGNLKPVDENVDKEISRALLSENLNHVDENLEEGDYIKAVEHRENEVEELQRVNGVENEVEDEKNGEFLTKGLADEGYCHDVVVDLGNGTQILNVESASNAEKLIHSSVNVPKKPRIKEGRRCGLCGGGTDGKPPQKLAHDAGDSESEAYSGSSPAEEPNYDLWDGFGDEPGWLGRLLGPINDRYGIAGIWVHQHCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRPGATIGCRVDRCPKTYHLPCARANGCIFDHRKFLIACTDHRHFFQPQYLTDMKKIKIKKMKLGLRKLLNDALRKDIEAEEKWLENCGEDEEFLKRESKRLHRDLARIAPMYIGGSDSEGKNIFEGWESVAGLENVIRCMKEVVILPLLYPEFFDGLGITPPRGVLLHGYPGTGKTLVVRALIGACARGDRRIAYFARKGADCLGKYVGDAERQLRLLFQVAERCQPSIIFFDEIDGLAPCRTKQQDQTHISVVSTLLALLDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSVDDRAAILALHTQMWPKPVAGNVLMWVAQKTAGFAGADLQALCTQAAITALKRSFPLHEILSAAGERGLCGKRTPLPAFYVEERDWLEAVSKAPPPCSHRESGMAANDIVSSPLPAHLIPCLLLPLSTLLVALYLDERVSLPPMLSKAATMIKVVIVSALNKRNMSSEYWWCHVDNFLHEPDIAIEIERKLGSSGVLVGGTQFPRCDDFNCDDDIGDDDSTRRFKLPLKHHGGSCKSLEHISLSSKHKSGFRILIAGNPQSGQRHLTSCLLHCFVGNMQIHKVDLATISQEGQGDVVLGITLLLKKCVSVGSCMLFMPRIDLWATNTHYRSTAESESCSEDDQAFKKEKSSVNLGQVTGGEHKLTPGEELHDIVHIASQAWISFVDEVDSLSLSTSFIIMATSEIPYQLLPQRVRQFFKSDLSDCSLSNALEHTVPRFSVQIDENFNATKVINLSASQLTRELVHLLVQWTHQKTHINTKVQEYETLNSVEGRAHNVDSTKSEISIDNRGLTNNPGESSIKDSPLACTRTIRGKSSVLVAISSFGYQILRYPHFAELCWVTSKLKEGPSADIRGPWKGWPFNSCIVRPASSLEKVGIDSDTFVKVKGKSSLVRGLIAVGLSAYRGAYTSLREVSLEVRKVFDHLMEQINEKIQAGKDRYQFVRLLSQVAYVEDMVNGWAYTLQSLEQDAQTPRIAMSQKLIGVNYPENIQVSSDNQLQSEECDPSRKGSHAAETLENGVCIEMTKVAGESSTYSNGMIAISEDDQLENSILNDSSNDRSSLHHGAEDQFVDHIQIKQNGRLSGSNEQETNRNSAVIDADSELVRLSNSSNSHPTSFDEFVGGKFSCSTKVTEIGEFDAKLDINDHSTDPGLSARTEILCSYHCCTDCVKVIHSLTTKILAREFLKEDSWTIEDFHDVVSTVSVELLSGVKRALSGKDNTWFDEESQNSRIKAYDTLFKDSHLQPCRCTIPKNIIGEHAECSGHSKQSASTEAKSWPTSQFGSDFKFIFRDGVLVSLDSEKDVSFLCKVQKLCLSSLIELILKTKKPFG 1841
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1783051 1791590 + Bpe023915.1 Bpe09g00245 108645

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00245 1841 SMART AAA_5 652 793 IPR003593 -
Bpe09g00245 1841 Gene3D - 792 884 - -
Bpe09g00245 1841 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 60 1837 - -
Bpe09g00245 1841 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 889 IPR027417 -
Bpe09g00245 1841 Pfam ATPase family associated with various cellular activities (AAA) 656 791 IPR003959 GO:0005524|GO:0016887
Bpe09g00245 1841 ProSiteProfiles Extended PHD (ePHD) domain profile. 413 533 IPR034732 -
Bpe09g00245 1841 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 434 535 IPR013083 -
Bpe09g00245 1841 MobiDBLite consensus disorder prediction 386 418 - -
Bpe09g00245 1841 CDD AAA 652 791 - -
Bpe09g00245 1841 Gene3D - 618 892 IPR027417 -
Bpe09g00245 1841 Pfam PHD-like zinc-binding domain 454 533 - -
Bpe09g00245 1841 Pfam AAA+ lid domain 818 849 IPR041569 -
Bpe09g00245 1841 PANTHER AAA DOMAIN-CONTAINING 60 1837 IPR045199 -
Bpe09g00245 1841 ProSitePatterns AAA-protein family signature. 761 779 IPR003960 GO:0005524|GO:0016887
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00245 - - - zju:107432546 1863.97
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00922 Bpe-Chr3:28931730 Bpe09g00245 Bpe-Chr9:1783051 1.38E-13 dispersed
Bpe09g00245 Bpe-Chr9:1783051 Bpe13g00740 Bpe-Chr13:13965113 4.77E-80 dispersed
Bpe09g00245 Bpe-Chr9:1783051 Bpe04g00687 Bpe-Chr4:4402373 1.22E-40 transposed
Bpe09g00245 Bpe-Chr9:1783051 Bpe02g00783 Bpe-Chr2:5647615 4.23E-41 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g170 . . . . Bpe09g00245 . . Bma13g00940 Cmo16g00439 . . . . . . . . . . . . . . . Cla10g00660 Cam10g0656 Cec10g0680 Cco10g0652 Clacu10g0679 Cmu10g1503 Cre10g0883 . . Cone14ag1047 Cone15ag1035 . . . . . Blo10g00749 . Bda12g00871 . . . . . . . . Cma16g00407 . Car16g00371 Cpe14g00341 . . . . . . . . Cla05g00998 Cam05g1089 Cec05g1097 Cco05g1091 Clacu05g1083 Cmu05g1033 Cre05g1108 . . Chy06g01166 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002378 1 1 1 1 1 2 1 2 3 1 2 2 1 1 3 1 2 2 1 2 3 3 2 2 7 2 1 5 3 1 60
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe09g00245 Bpe_Chr09 FPKM 0.290679 0.0 1.300699 0.689102 1.060108 0.382367 0.60589 0.0 0.0 0.0