Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00255 ATGGCTCAATTCTGCTTTTGTATTCCAAAAAGTCGAGCTTCCTCCACGAAACAAACAGTTGGAGTTGACGACATTGATGAAGTGGTTTCTAACATTGAAAATGTGCGCTTATACTCTTACAAAGAACTAATGACGGCCACTGGAAATTTTAGTCCTGCAAATAAGATTGGACAGGGAGGTTTTGGCCCTGTTTACAAGGGAAGGCTCAAAAATGGATCCATGGCTGCTATAAAGGTACTCTCTGCGGAGTCAACCCAAGGCGTAAGAGAATTTTTGACAGAAATTAATGTAATTACAGATATTGAGCACGAAAACCTCGTTAAATTGTACGGCTGCTGCATTGAAGGGAACAACAGGATCTTGGTTTATGGTTATCTAGAAAATAATAGCCTTGCACAAACACTTCTTGGTGAAGGCCACAGTAGTATCCAATTCAATTGGCAAACGAGGCATAAAATCTGTGTTGGTATTGCACGTGGGCTTGCCTTCCTTCACGAGGAAGTTAAACCACATATCATCCACAGAGATATTAAAGCAAGTAATATTCTACTGGATAAGAACTTAATGCCAAAAATTTCAGATTTTGGTCTTGCAAAGCTTATTCCAGATTACGCAACTCATGTTAGTACACGTGTTGCTGGAACAATTGGTTATCTAGCTCCAGAGTACGCCATAATGGGCCGTCTAACGAGAAAGTCTGATATATATAGCTTCGGTGTTTTGTTGATGGAGATAGTTACTGGGAGGTGTAACACAAACAGGCGATTGCCTGCTGAAGAACAGTACCTTCTTCTGAGGGTATGGGCGCATTATCAGAGGGGGAATTTGGATGAAATGTTAGACTCATCGATGAGTGGGGATTTCAATGTAAATGAGATTTGTAAAGTCTTAAAGATCAGTCTTCATTGCACCCAAGAGTTTCCAAAACTTCGACCATCTATGTCACTTGTCGTCAAGATGTTAACAGGCGAAATAGATGTTGATGATAAATCTATCTCAAAACCAGGATTACTTCCTGAGTTCATAATTAATAAAGATGGGGAAGACAAGAAAAATGAGTTTGACTCCAAGGGGACATCTAGCTCCACTGGGTTAGGGAAGCTAGTTACTTCATCTTCGTCTTCAGAGAATACCACCAGCTCATATGCTCCATTGTAA 1158 40.33 MAQFCFCIPKSRASSTKQTVGVDDIDEVVSNIENVRLYSYKELMTATGNFSPANKIGQGGFGPVYKGRLKNGSMAAIKVLSAESTQGVREFLTEINVITDIEHENLVKLYGCCIEGNNRILVYGYLENNSLAQTLLGEGHSSIQFNWQTRHKICVGIARGLAFLHEEVKPHIIHRDIKASNILLDKNLMPKISDFGLAKLIPDYATHVSTRVAGTIGYLAPEYAIMGRLTRKSDIYSFGVLLMEIVTGRCNTNRRLPAEEQYLLLRVWAHYQRGNLDEMLDSSMSGDFNVNEICKVLKISLHCTQEFPKLRPSMSLVVKMLTGEIDVDDKSISKPGLLPEFIINKDGEDKKNEFDSKGTSSSTGLGKLVTSSSSSENTTSSYAPL 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1868286 1870820 - Bpe023926.1 Bpe09g00255 108655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00255 385 MobiDBLite consensus disorder prediction 357 385 - -
Bpe09g00255 385 Gene3D Transferase(Phosphotransferase) domain 1 126 333 - -
Bpe09g00255 385 CDD STKc_IRAK 56 323 - -
Bpe09g00255 385 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 4 363 - -
Bpe09g00255 385 Pfam Protein tyrosine and serine/threonine kinase 54 320 IPR001245 GO:0004672|GO:0006468
Bpe09g00255 385 SUPERFAMILY Protein kinase-like (PK-like) 30 321 IPR011009 -
Bpe09g00255 385 Gene3D Phosphorylase Kinase; domain 1 21 125 - -
Bpe09g00255 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Bpe09g00255 385 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 363 - -
Bpe09g00255 385 ProSiteProfiles Protein kinase domain profile. 50 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00255 385 SMART serkin_6 50 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00255 385 MobiDBLite consensus disorder prediction 348 385 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01581 Bpe-Chr4:22099642 Bpe09g00255 Bpe-Chr9:1868286 2.98E-122 dispersed
Bpe09g00255 Bpe-Chr9:1868286 Bpe09g00294 Bpe-Chr9:2347478 5.81E-167 dispersed
Bpe08g00370 Bpe-Chr8:2248862 Bpe09g00255 Bpe-Chr9:1868286 1.27E-39 transposed
Bpe03g00881 Bpe-Chr3:28580832 Bpe09g00255 Bpe-Chr9:1868286 8.05E-169 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63503 PF07714 PK_Tyr_Ser-Thr 4.20E-47 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00255 - - qlo:115957329 516.924