Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00268 ATGGAAATTGATGGTAACATCTACGAAGAGGACTTGTTTGCTCAAGGTCAATCAAACTTTTATTCAGTTGGAGAAAGGTGGGGTTATAGCAGTACAGGGATTTTCATGGGTAATAGGAATGCTCCTAACTTAGCTAATAACTCATTTGGTCTGACTGTGAGTGCTCCAAGCTTCTACGAGACTGCTCGACTCTCCCCCTTGTCGCTTAATTACTACGGCCTCTGTCTTCGAAAGGGAAGCTACAATGTCAAGCTGCATTTTGCTGAAATAATGTTTTCGGATGACCAAACATTTAGTAGTTTGGGGAGGCGTATATTTGATGTCTCGGTTCAAGGAAATTTAGTTTTAAAGGATTTTAATGTTGCGGAGAGAGCTGGGGGAGTTGGTAAGGGCTTCATTTACGAGAATAAAAATGTTTTCGTTAATGGCAGCACTCTAGAGATCCACTTATACTGGGCGGGTAAAGGAACTACTGCTATTCCAGACAGAGGAGTTTATGGCCCTCTTATATCTGCGATCACAGTAACACCAAGCAAGTACTATGATGTTGAGACTGGAGGTTTATCCGCAGGAGCTATTGCTGGTATTGTAATTGCTTCGTGTGTGGTAGTTATATTGGTACTTGTAGTCCTCCGAATCAAAGGTTACATATGTGCAAAAGAGATTGAAGAAAGTGAATTACGTGGCCTAGAATTGCAAACAGGCCATTTCTCTTTGAGACAAATTAAATCTGCTACAGGCAATTTTGATCCTCAAAATAAGATAGGTGAAGGAGGCTTTGGACCAGTATACAAGGGAGTCCTTTTAGACGGATCTTTAATTGCCGTTAAGCAACTTTCCTCAAAGTCGAAGCAAGGGAATCGGGAATTTGTCACTGAAATTGGCATGATATCGGCTTTGCAGCACCCAAATCTTGTTAAGCTTTATGGATGTTGCATTGAAGGACATCAGTTATTGTTAGTATATGAATACATGGAAAATAATAGTCTTGCTCGTGCTCTCTTTGGTTCGTTGGAACACCGGCTCCACTTAGATTGGGGAGCAAGGAAGAAGATATGCATGGGCATAGCAAGGGGATTAGCTTATCTTCACGAGGAATCAAGGTTGAAAATTGTACACAGAGATATAAAGGCCACAAATGTGCTGCTTGATAAAAATCTAACAGCAAAGATCTCTGACTTTGGTTTGGCTAAGCTTGATGAAGAGGAGAATACCCACATAAGCACTCGGATTGCTGGAACAATAGGCTACATGGCTCCTGAATATGCAATGAGGGGTTACTTAACTGACAAAGCAGATGTCTACAGCTTTGGTGTTGTGGCCTTGGAGATTGTCAGTGGAAAAAGCAACACAAATTACAGGCCAAAGGAAGATTTTGTTTATCTCCTTGATTGGGCATACGTCCTGCAAGAGCAAGGCAATCTTCTCGAACTCGTTGATCCGAGCCTTGGTTCAAACTACTCGAAGCAAGAGGCGATGAGGATGCTCAATTTGGCTCTATTATGCACCAATCCATCTCCCACTCTCAGGCCACCCATGTCCTCTGTAGTGAGCATGCTGGACGGCAAACTTGCAGTTCAAGCATCCCTAGTCAAACGCACGATGGATCAGGACGCAAGATTTAAGGCCTTTGAGAAGCTTTCACAAGACAGCCAAACTATGGTCTCCTCAATCCCTCGGGACAGTCTTGCTCAGAAAAGCACGTTAGTGGACGGGCCTTGGGTCGATTCCTCAGTTTCCGTTGAAAGTATAAATGAGACCCATGATTGTTCTCCATCAAGTAAGCTCCTTTAG 1794 42.98 MEIDGNIYEEDLFAQGQSNFYSVGERWGYSSTGIFMGNRNAPNLANNSFGLTVSAPSFYETARLSPLSLNYYGLCLRKGSYNVKLHFAEIMFSDDQTFSSLGRRIFDVSVQGNLVLKDFNVAERAGGVGKGFIYENKNVFVNGSTLEIHLYWAGKGTTAIPDRGVYGPLISAITVTPSKYYDVETGGLSAGAIAGIVIASCVVVILVLVVLRIKGYICAKEIEESELRGLELQTGHFSLRQIKSATGNFDPQNKIGEGGFGPVYKGVLLDGSLIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGHQLLLVYEYMENNSLARALFGSLEHRLHLDWGARKKICMGIARGLAYLHEESRLKIVHRDIKATNVLLDKNLTAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEDFVYLLDWAYVLQEQGNLLELVDPSLGSNYSKQEAMRMLNLALLCTNPSPTLRPPMSSVVSMLDGKLAVQASLVKRTMDQDARFKAFEKLSQDSQTMVSSIPRDSLAQKSTLVDGPWVDSSVSVESINETHDCSPSSKLL 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1967856 1971064 - Bpe023939.1 Bpe09g00268 108668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00268 597 CDD STKc_IRAK 255 522 - -
Bpe09g00268 597 Gene3D Transferase(Phosphotransferase) domain 1 325 546 - -
Bpe09g00268 597 Pfam Protein tyrosine and serine/threonine kinase 252 519 IPR001245 GO:0004672|GO:0006468
Bpe09g00268 597 Gene3D - 1 179 - -
Bpe09g00268 597 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 561 - -
Bpe09g00268 597 Gene3D Phosphorylase Kinase; domain 1 215 324 - -
Bpe09g00268 597 SUPERFAMILY Protein kinase-like (PK-like) 233 523 IPR011009 -
Bpe09g00268 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
Bpe09g00268 597 Pfam Malectin domain 3 173 IPR021720 -
Bpe09g00268 597 ProSiteProfiles Protein kinase domain profile. 249 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00268 597 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 2 561 - -
Bpe09g00268 597 SMART serkin_6 249 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00873 Bpe-Chr3:28496208 Bpe09g00268 Bpe-Chr9:1967856 0 dispersed
Bpe09g00268 Bpe-Chr9:1967856 Bpe12g00277 Bpe-Chr12:3049621 0 dispersed
Bpe03g00872 Bpe-Chr3:28467824 Bpe09g00268 Bpe-Chr9:1967856 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63504 PF07714 PK_Tyr_Ser-Thr 6.40E-49 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00268 - - jre:108985003 894.034