Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00270 ATGAAGATTCAATGCAATGTCTGCGAGGCAGCGGAGGCGCACGTTTTATGCTGCGCGGACGAGGCGGCGTTATGCTGGGCTTGCGACGAGAAGGTTCACGCAGCCAACAAGCTGGCCAGCAAGCACCAGAGGGTTCCTCTTTCTGGCTCGTCTTCTCAAATGCCCAAATGTGACATTTGTCAGGAGATGAGTGGCTATATCTTCTGTTTAGAGGATCGAGCTTTACTTTGCCGAAAATGCGATGTCGCAATACACACGGCAAATGCTTTTGTATCGGCTCATCAGAGATTTCTTCTTACTGGTGTGAAAGTAGGTCTTGAACCCACTGTACCTCTTGCTTCCTCTTTCGAGTTGAAGCCTCAAAGTAGAGAGAAAACTTTGGAATCAAAGGGTTGCTCAGGCCCGCAAAGAGGCTTCTCAAATCAGTCATCTGGTGAATTCAGTCAACAATTGCCTGTAAATCGTCATGGGATCGGAGACTTCGCACCAACTGAGGCTCCTACGCATACCGGAGGATTTGTATCTGGTGGGCTTCCTCAGTGGCATTTAGACGAGTTTGTGGGTATGACTGGATTCAGTCAGAATTACCGGCCCGGCGATATGGACAATGGTTCATCTAAGGCTGATAGTGGTAAGCTGGGAGATTCCGACTCATCCGTTCTAAGAACAGGCGACAACGATCTGGACGACGGCGACGAGTGCTTGGGTCAGGTTCCGGATTCATCTCGAGCCGTTCCTCACAATCCGTCTCCACCTACAGCTTCAGGCTTGTACTGGCCGAGAAATTACTACAATTCATGGGATACCACAGCCTATGTTCCCGACATATACAGCTCATCGCCAGAGCAGAAGCCCCACCATTATCGACATGGTGGTTTGGCATCAAAACGGCGGAGACAATTC 903 49.94 MKIQCNVCEAAEAHVLCCADEAALCWACDEKVHAANKLASKHQRVPLSGSSSQMPKCDICQEMSGYIFCLEDRALLCRKCDVAIHTANAFVSAHQRFLLTGVKVGLEPTVPLASSFELKPQSREKTLESKGCSGPQRGFSNQSSGEFSQQLPVNRHGIGDFAPTEAPTHTGGFVSGGLPQWHLDEFVGMTGFSQNYRPGDMDNGSSKADSGKLGDSDSSVLRTGDNDLDDGDECLGQVPDSSRAVPHNPSPPTASGLYWPRNYYNSWDTTAYVPDIYSSSPEQKPHHYRHGGLASKRRRQF 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2009553 2012206 - Bpe026214 Bpe09g00270 108670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00270 301 MobiDBLite consensus disorder prediction 194 255 - -
Bpe09g00270 301 MobiDBLite consensus disorder prediction 127 147 - -
Bpe09g00270 301 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bpe09g00270 301 Gene3D Classic Zinc Finger 1 93 - -
Bpe09g00270 301 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 300 - -
Bpe09g00270 301 CDD Bbox1_BBX-like 5 47 - -
Bpe09g00270 301 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bpe09g00270 301 SMART bboxneu5 52 99 IPR000315 GO:0008270
Bpe09g00270 301 MobiDBLite consensus disorder prediction 278 301 - -
Bpe09g00270 301 PANTHER B-BOX ZINC FINGER PROTEIN 18 1 300 - -
Bpe09g00270 301 Pfam B-box zinc finger 53 94 IPR000315 GO:0008270
Bpe09g00270 301 MobiDBLite consensus disorder prediction 121 147 - -
Bpe09g00270 301 CDD Bbox1_BBX-like 56 99 - -
Bpe09g00270 301 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00902 Bpe-Chr4:6044861 Bpe09g00270 Bpe-Chr9:2009553 3.07E-45 dispersed
Bpe05g00323 Bpe-Chr5:16885232 Bpe09g00270 Bpe-Chr9:2009553 2.11E-35 dispersed
Bpe05g00975 Bpe-Chr5:22602529 Bpe09g00270 Bpe-Chr9:2009553 3.44E-43 dispersed
Bpe09g00270 Bpe-Chr9:2009553 Bpe15g00849 Bpe-Chr15:18497243 2.95E-37 dispersed
Bpe11g00513 Bpe-Chr11:3964345 Bpe09g00270 Bpe-Chr9:2009553 1.13E-08 dispersed
Bpe03g00871 Bpe-Chr3:28466255 Bpe09g00270 Bpe-Chr9:2009553 1.27E-168 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21866 PF00643 zf-B_box 1.70E-06 No_clan Bpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00270 - - csv:101209756 392.504