Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00277 ATGGCGGATGAAGTAGTTCTTTTGGATTTCTGGCCCAGCCCTTTTGGGATGAGGGTGAGGGTCGCTTTGGCTGAGAAGGGTATCGAGTTTGAGTACAAGGAGGAGGATTTGAGCAACAAGAGCCCTCTTCTTCTTCAGATGAACCCGGTTCACAAGAAGATTCCGGTTCTCATTCACAATGGGAAGCCTGTTTGTGAATCCCTGATTGCTGTCCAATACATCGACGAGGCCTGGCCGGAGAAATCTCCATTGTTACCGGCGGATCCTTTTCTCAGATCTCAGGCCAGGTTCTGGGCTGACTATGTGGACAAGAAGGTGGATAAAAATGTGCAGGTATTTGAGCTAGGGAAGAAGTTGTGGCTGACAAAAGGAGAAGAACTAGAAACAGCCAAGGCTCAATATCTAGAGTGCTTGAAGGCTCTCGAGGCTGAGCTTGGAGACAAACCGTTCTTCGGAGGGGAGAGTTTCGGCTTCGTCGACGTGGCGTTCATTCCGCATTACACGTGGTTTTCAGGCTACGAGATGTTTGGGAAGTTCAGGACGGAGGAGGAATGTCCTAAACTCATGGCTTGGGTCAAGAGATGCTTGGAGAAAGAGAGTGTTTCAAAGGCTCTCCCTGATCAAGCAAAGGTTTATGGTTTTATTTTGAAGTTTTCTGGGGTACAGTAG 669 48.43 MADEVVLLDFWPSPFGMRVRVALAEKGIEFEYKEEDLSNKSPLLLQMNPVHKKIPVLIHNGKPVCESLIAVQYIDEAWPEKSPLLPADPFLRSQARFWADYVDKKVDKNVQVFELGKKLWLTKGEELETAKAQYLECLKALEAELGDKPFFGGESFGFVDVAFIPHYTWFSGYEMFGKFRTEEECPKLMAWVKRCLEKESVSKALPDQAKVYGFILKFSGVQ 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2088881 2090094 - Bpe023948.1 Bpe09g00277 108677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00277 222 SFLD Main (cytGST) 2 217 - -
Bpe09g00277 222 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Bpe09g00277 222 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 218 - -
Bpe09g00277 222 CDD GST_N_Tau 5 78 - -
Bpe09g00277 222 CDD GST_C_Tau 89 218 IPR045074 GO:0004364|GO:0006749
Bpe09g00277 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 214 IPR010987 -
Bpe09g00277 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 218 IPR045073 -
Bpe09g00277 222 Gene3D Glutaredoxin 1 87 - -
Bpe09g00277 222 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Bpe09g00277 222 SUPERFAMILY GST C-terminal domain-like 76 218 IPR036282 -
Bpe09g00277 222 Coils Coil 124 144 - -
Bpe09g00277 222 Pfam Glutathione S-transferase, C-terminal domain 127 194 - -
Bpe09g00277 222 Gene3D - 88 221 - -
Bpe09g00277 222 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Bpe09g00277 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00277 Bpe-Chr9:2088881 Bpe12g00457 Bpe-Chr12:10322389 1.41E-48 dispersed
Bpe09g00277 Bpe-Chr9:2088881 Bpe09g00278 Bpe-Chr9:2101810 7.34E-131 tandem
Bpe13g00917 Bpe-Chr13:15139484 Bpe09g00277 Bpe-Chr9:2088881 7.32E-12 transposed
Bpe03g00861 Bpe-Chr3:28407574 Bpe09g00277 Bpe-Chr9:2088881 7.00E-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00277 K00799 - cpap:110812529 348.206