Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00278 ATGGCGGATGAGGTGGTTCTTTTGGATTTCTGGCCCAGCCCTTTTGGGATGAGGTTGAGGGTCGCTTTGGCTGAGAAGGGTATCGGGTATGAGTACAAGGAGGAGGATTTGAGGAACAAAAGCCCTCTTCTTCTTCAGATGAACCCGATTCACAAGAAGATTCCGGTTCTCATTCACAATGGGAAGGCTGTTTGTGAATCCCTGATTGCTGTCCAGTATATTGACGAGGTTTGGCCGGAGAAGTCTCCATTGCTTCCGGCGGATCCTTTTCTCAGATCTCAGGCCAGGTTCTGGGCTGACTATGTCGACAAGAAGATTTACGAGCTAGGGAGGAAGCTATGGATGACAAAAGGAGAAGAACAAGAAACGGCAAAGGTGGAATATCTAGAGTGCTTGAAGACGCTTGAAACTGAGCTAGGAGACAAACCCTTCTTCGGAGGGGAGTGTTTTGGATACGTCGATGTGGTGTTCATTCCGTTCTACACATGGTTTTTGGCCTACGAGACACACGCGAAGTTCACGACAGAGGAAGAATGTCCTAAACTCATGGGTTGGGTCAAGAGATGCTTGGAGAAAGAGAGTGTTTCAAAGTCTCTTCCTGAGCAGGAGAAGGTCCTTGGCTTTGTTTCCCATTTGAGAAAGACATTTGGGATAGAGTAG 660 47.73 MADEVVLLDFWPSPFGMRLRVALAEKGIGYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKAVCESLIAVQYIDEVWPEKSPLLPADPFLRSQARFWADYVDKKIYELGRKLWMTKGEEQETAKVEYLECLKTLETELGDKPFFGGECFGYVDVVFIPFYTWFLAYETHAKFTTEEECPKLMGWVKRCLEKESVSKSLPEQEKVLGFVSHLRKTFGIE 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2101810 2103218 - Bpe023949.1 Bpe09g00278 108678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00278 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Bpe09g00278 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Bpe09g00278 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Bpe09g00278 219 Gene3D Glutaredoxin 1 87 - -
Bpe09g00278 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Bpe09g00278 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Bpe09g00278 219 CDD GST_N_Tau 5 78 - -
Bpe09g00278 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Bpe09g00278 219 Pfam Glutathione S-transferase, C-terminal domain 124 188 - -
Bpe09g00278 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 212 - -
Bpe09g00278 219 Gene3D - 88 219 - -
Bpe09g00278 219 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Bpe09g00278 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Bpe09g00278 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 212 IPR045073 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00861 Bpe-Chr3:28407574 Bpe09g00278 Bpe-Chr9:2101810 1.77E-122 dispersed
Bpe04g00756 Bpe-Chr4:4840940 Bpe09g00278 Bpe-Chr9:2101810 1.68E-19 dispersed
Bpe04g01694 Bpe-Chr4:22873085 Bpe09g00278 Bpe-Chr9:2101810 8.76E-09 dispersed
Bpe09g00278 Bpe-Chr9:2101810 Bpe12g00457 Bpe-Chr12:10322389 1.59E-50 dispersed
Bpe09g00277 Bpe-Chr9:2088881 Bpe09g00278 Bpe-Chr9:2101810 7.34E-131 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00278 K00799 - cpap:110812529 365.155