Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe09g00325 | ATCGGACTTGTTCTGATGGCCTCGGGGGCTGGATCTCCTTGCGGAGCCTGCAAGTTTCTTAGGCGCAAGTGTGCAGCGGATTGCATCTTTGCGCCCTATTTTTGCTCAGAACAAGGCCCTGCTCGATTTGCTGCCATCCATAAAGTGTTTGGAGCTAGCAATGTGTCGAAGCTTTTGCTGCATGTCCCTGTTTCTGATCGATGCGAGGCTGTTGTTACTATTGCTTACGAAGCTCAAGCTAGAATTAGAGACCCTGTTTATGGCTGTGTTTCTCATATTTTTGCTCTGCAACAACAGGTGGCATGCTTGCAAGCACAACTAGTGCAAGCAAAGGCTCAGCTGGGTCAGAAAGTGATTGATTCTCACAGAATAGGGAATCAATGGACACTGAATAACGTTGTTAATGGAGTTTCAAGCTTTCCAAATTACCCTTCTCACATAAACTCTATATCCCCACAGAGCTCAGTTGAATCCTTAGATTACACCAACGAAGCAGTAAATCTGCAGGAAATCAAAAGCAGATCAGAAGAAGAATTTCGATACCAGACTTTCTACAAGAAAAGAGCTTATAATAGTGATGAACTTCAAGCATTGGCTTTCAGAATGATGAGGAGTTAG | 618 | 44.01 | IGLVLMASGAGSPCGACKFLRRKCAADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPVSDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLVQAKAQLGQKVIDSHRIGNQWTLNNVVNGVSSFPNYPSHINSISPQSSVESLDYTNEAVNLQEIKSRSEEEFRYQTFYKKRAYNSDELQALAFRMMRS | 205 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2947529 | 2948495 | + | Bpe023993.1 | Bpe09g00325 | 108725 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe09g00325 | 205 | Coils | Coil | 93 | 113 | - | - | |
Bpe09g00325 | 205 | Pfam | Lateral organ boundaries (LOB) domain | 13 | 111 | IPR004883 | - | |
Bpe09g00325 | 205 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 16 | 7 | 204 | - | - | |
Bpe09g00325 | 205 | ProSiteProfiles | LOB domain profile. | 12 | 114 | IPR004883 | - | |
Bpe09g00325 | 205 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 7 | 204 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe09g00325 | Bpe-Chr9:2947529 | Bpe10g00374 | Bpe-Chr10:11320668 | 2.18E-58 | dispersed | |
Bpe09g00325 | Bpe-Chr9:2947529 | Bpe09g00327 | Bpe-Chr9:3009051 | 1.34E-53 | proximal | |
Bpe04g01365 | Bpe-Chr4:20273610 | Bpe09g00325 | Bpe-Chr9:2947529 | 1.67E-55 | transposed | |
Bpe03g00906 | Bpe-Chr3:28789928 | Bpe09g00325 | Bpe-Chr9:2947529 | 1.61E-64 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21871 | PF03195 | LOB | 9.80E-37 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe09g00325 | K13944 | - | qsu:111987550 | 262.692 |