Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe09g00327 | ATGACCGGCTCTGGTTCTCCTTGTGGAGCCTGCAAATTCCTGAGAAGAAAATGCGTGAGAGGGTGTGTTTTCGCACCTTATTTCTGCCATGAACAAGGAGCTTCACATTTTTCTGCCATTCACAGGGTTTTCGGAGCTAGCAACGTATCGAAGATGCTATCTCACCTTCCGGTTTCTGAACGTTTGGAAGCCGCCATGACAATCTCTTATGAAGCTCAAGCTAGGGTTGAAGACCCTATCTATGGCTGCGTTTCTCAAATCTTTGCGCTCCAGCAACAGGTTGTCAATTTGCAGGCTCAACTAGCTTTTCTCAGAGAACAAACAGCTCAAAGCAATTCCAACAGCTCTAATATGGAAAACACTTGTCTGAAATTCAATGCAAAATCTCATCACCTGCAATCCAAAGTTGATTACCACACGTGGTTTCAATCTGAAATCTTAAACACAATTCCACTACCCGATCCAAATCTGACAAACAACGTTAGCGATTCAAAGGCTATGGAATATTATGAGAATCCACTGATGCTCGGCGAAAACATCAGCTATCAAAGCTATGGAGAGGGTTCTCATTCGATGCAATTGAATTTCAAAGATGTAGAGGACCTTCGATCAATAGCTTTCACTCACGCGAAGTAA | 636 | 43.08 | MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGASHFSAIHRVFGASNVSKMLSHLPVSERLEAAMTISYEAQARVEDPIYGCVSQIFALQQQVVNLQAQLAFLREQTAQSNSNSSNMENTCLKFNAKSHHLQSKVDYHTWFQSEILNTIPLPDPNLTNNVSDSKAMEYYENPLMLGENISYQSYGEGSHSMQLNFKDVEDLRSIAFTHAK | 211 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3009051 | 3010010 | - | Bpe023996.1 | Bpe09g00327 | 108727 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe09g00327 | 211 | ProSiteProfiles | LOB domain profile. | 6 | 108 | IPR004883 | - | |
Bpe09g00327 | 211 | Coils | Coil | 87 | 107 | - | - | |
Bpe09g00327 | 211 | Pfam | Lateral organ boundaries (LOB) domain | 7 | 104 | IPR004883 | - | |
Bpe09g00327 | 211 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 1 | 156 | - | - | |
Bpe09g00327 | 211 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 17-RELATED | 1 | 156 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe06g00431 | Bpe-Chr6:15701204 | Bpe09g00327 | Bpe-Chr9:3009051 | 2.59E-69 | dispersed | |
Bpe09g00327 | Bpe-Chr9:3009051 | Bpe10g00374 | Bpe-Chr10:11320668 | 1.71E-71 | dispersed | |
Bpe09g00325 | Bpe-Chr9:2947529 | Bpe09g00327 | Bpe-Chr9:3009051 | 1.34E-53 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21872 | PF03195 | LOB | 4.10E-36 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe09g00327 | K13945 | - | vvi:100266975 | 249.595 |