Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00332 ATGGAATTGGAATTCTTGCCGGAATCTCTGTTCGGCCCGCCGGAATCATTTTCTCGGAATGAGCTCTTCGATCACCAAAACTCTCTCCCGTTCAACATGGACGACTCACAGGAAATGCTCCTGTACGAAGCAGTAGCAGAGGGAGTAAAGTTAGAAGTTTCAGAAAGGAGCTCATTCGGAGCGATTAAGGAAGAGGAAGCGAGCTCCGGCTCTGAAAAAGAAGGGCAGCCATTAAAGGCAAAGTCGTACAGAGGGGTGAGGAGGAGGCCATGGGGCAAGTACGCTGCAGAAATAAGAGACTCAACAAGGCATGGGATAAGGGTATGGCTGGGGACGTTCGAGAGCGCAGAGGCAGCTGCCTTGGCCTACGATCAAGCAGCATTTTCACTGAGAGGTTCAATGGCGGTTTTGAATTTCCCTGTTGAAATGGTGAGCCAGTCTCTTAAGGAAATCAAGTACGGATTTGAAGATGGCTGTTCTCCTGTTACTGCTCTGAAGAGGAAGCATTCGATGAGGAAGGAGAGTGGCTCTAGGAAGAGCATAAAAATGGCGGAGAAGAGGAAGAAGAGTGTAGTGGTTTTAGAAGACTTGGGGAGTGAGTATTTAGAGCAGCTCTTGAGTTTATGTTCTTCAAATGCTCCAAATTTAAAATAA 654 47.4 MELEFLPESLFGPPESFSRNELFDHQNSLPFNMDDSQEMLLYEAVAEGVKLEVSERSSFGAIKEEEASSGSEKEGQPLKAKSYRGVRRRPWGKYAAEIRDSTRHGIRVWLGTFESAEAAALAYDQAAFSLRGSMAVLNFPVEMVSQSLKEIKYGFEDGCSPVTALKRKHSMRKESGSRKSIKMAEKRKKSVVVLEDLGSEYLEQLLSLCSSNAPNLK 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3195004 3195657 + Bpe024005.1 Bpe09g00332 108732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00332 217 CDD AP2 81 141 IPR001471 GO:0003700|GO:0006355
Bpe09g00332 217 SMART rav1_2 82 146 IPR001471 GO:0003700|GO:0006355
Bpe09g00332 217 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 20 208 - -
Bpe09g00332 217 PANTHER DNA-BINDING DOMAIN 20 208 IPR044808 GO:0003700|GO:0009873
Bpe09g00332 217 SUPERFAMILY DNA-binding domain 82 142 IPR016177 GO:0003677
Bpe09g00332 217 ProSiteProfiles AP2/ERF domain profile. 82 140 IPR001471 GO:0003700|GO:0006355
Bpe09g00332 217 Pfam AP2 domain 82 132 IPR001471 GO:0003700|GO:0006355
Bpe09g00332 217 Gene3D AP2/ERF domain 81 142 IPR036955 GO:0003700|GO:0006355
Bpe09g00332 217 PRINTS Ethylene responsive element binding protein signature 122 142 IPR001471 GO:0003700|GO:0006355
Bpe09g00332 217 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Bpe09g00332 217 MobiDBLite consensus disorder prediction 62 81 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00332 Bpe-Chr9:3195004 Bpe10g00373 Bpe-Chr10:11289704 2.66E-63 dispersed
Bpe03g00910 Bpe-Chr3:28830105 Bpe09g00332 Bpe-Chr9:3195004 5.77E-104 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21873 PF00847 AP2 8.20E-14 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00332 K14516 - pop:7454341 246.128