Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00407 CCATTGGCCATGGCTTGCAGCGCTGCCGACCTTCACTCCCTCCTCGGCGGCACAGCCAATGCCACCTCTGCTGCCGCCTACATCTGCTCACAATTCGATGCCGTTTCCAGCAAGTTTATTGACACAAACTATGCCATCGATAACACCTATCTTCTCTTCTCTGCCTACCTGGTTTTCGCCATGCAGCTCGGCTTTGCCATGCTCTGTGCAGGCTCGGTTCGAGCGAAGAACACGATGAACATCATGCTGACCAACGTTCTCGACGCCGCAACTGGTGGTCTCTTCTATTATCTCTTTGGATTTGCGTTGGCTTTTGGCACTCCTTCAAATGGGTTCATTGGGCAGCACTTTTTTGGGCTGAGTAAATTTCCTTCTCCATCGTTTGACTATGGCTTCTTTCTGTATCAGTGGGCTTTCGCCATTGCAGCTGCTGGAATAACCAGCGGTTCGATTGCAGAGAGAACCCAGTTTGTTTCTTATTTGATCTATTCTTCTTTCTTGACCGGTTTGGTTTACCCTATTGTTTCCCACTGGTTCTGGTCTGCTGCTGGCTGGGGAAGCCCTGCTAGAGCTGATGGTCTTTTGTTTGGCTCTGGGGTTATTGACTTTGCTGGCTCCGGTGTCGTTCACTTGGTTGGTGGCATTGCTGGCTTGTGGGGAGCATTCATTGAGGGGCCGAGAATTGGCCGATTCGACCACGGAGGCAAGGCCGTAGCTCTACGCGGCCACAGCGGCACACTCGTCGTTCTTGGCACATTCCTTCTCTGGTTCGGTTGGTACGGTTTCAACCCAGGCTCGTTCCTCAACGTAGCCAAGGCTTATGGAGAAAGCGGATCGTATTATGGGCAGTGGAGTGCAATAGGAAGAACTGCAGTGACGACAACCCTCGCTGGCTGCTCTGCCGCCCTGACAACCCTCTTTGGAAAACGATTGCTCTCGGGCCATTGGAACGGCACTGACGTGTGCAACGGCTTGCTCGGTGGGTTCGCAGCCATCACCGGTGGGTGCTCCGTGGTTGACCCGTGGGCTGCAGTTCTATGTGGGTTCGTGGCAGCCTGGGTTCTTATAGGCTTCAACAAGCTAGCTGAGAAACTCAAGTACGACGACCCGCTTGAAGCGGCTCAGCTCCACGGAGGGTGCGGCATGTGGGGAATAATCTTCACTGGATTGTTTGCCAAAAAAGCTTATGTCAACGAGATATATCAAGGGCAGCCAGACAGGCCTTATGGGCTGCTCATGGGCGGTGGAGGAAAGCTATTGGCTGCACACATTGTTCAGATACTGGCCATTCTAGGCTGGGTGAGCATAACAATGGGGACTCTCTTCTGGATCCTGCACAAACTGAAGCTTTTGAGAATTTCTGCTGAAGAGGAAATGGCAGGAATGGATTTGACCAGCCATGGAGGGTTTGCATATGAGTACAAGGACGAGAACAAATCTGAGCTCATCATGCAGGGGGATCCTTGA 1467 52.42 PLAMACSAADLHSLLGGTANATSAAAYICSQFDAVSSKFIDTNYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGLFYYLFGFALAFGTPSNGFIGQHFFGLSKFPSPSFDYGFFLYQWAFAIAAAGITSGSIAERTQFVSYLIYSSFLTGLVYPIVSHWFWSAAGWGSPARADGLLFGSGVIDFAGSGVVHLVGGIAGLWGAFIEGPRIGRFDHGGKAVALRGHSGTLVVLGTFLLWFGWYGFNPGSFLNVAKAYGESGSYYGQWSAIGRTAVTTTLAGCSAALTTLFGKRLLSGHWNGTDVCNGLLGGFAAITGGCSVVDPWAAVLCGFVAAWVLIGFNKLAEKLKYDDPLEAAQLHGGCGMWGIIFTGLFAKKAYVNEIYQGQPDRPYGLLMGGGGKLLAAHIVQILAILGWVSITMGTLFWILHKLKLLRISAEEEMAGMDLTSHGGFAYEYKDENKSELIMQGDP 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6555778 6557244 + Bpe024087.2 Bpe09g00407 108807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00407 488 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bpe09g00407 488 TIGRFAM amt: ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bpe09g00407 488 PANTHER AMMONIUM TRANSPORTER 3 480 - -
Bpe09g00407 488 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bpe09g00407 488 Gene3D Ammonium transporter AmtB like domains 24 486 IPR029020 -
Bpe09g00407 488 PANTHER AMMONIUM TRANSPORTER 3 480 - -
Bpe09g00407 488 SUPERFAMILY Ammonium transporter 45 453 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00407 Bpe-Chr9:6555778 Bpe11g01296 Bpe-Chr11:9691859 0 dispersed
Bpe09g00407 Bpe-Chr9:6555778 Bpe03g00930 Bpe-Chr3:28966235 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00407 K03320 - jre:109020544 855.514