Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe09g00408 | ATTCGCAATAGCACGGAGAGGAGAAACTTGGGTTTCTTTTCCTGTGGAACCGGGAATCCGATTGACGACTGTTGGCGGTGTGACTCACGCTGGCAGATGCGCCGGAAGCACCTGGCCGACTGTGGCATTGGATTCGGACGCAATGCTATTGGTGGTCGAGATGGTCGATTCTATGTAGTCTCCGATTCTGGAGATGACGACCCTGTGAATCCAAGGCCTGGCACTCTTCGCCACGCTGTTATTCAGGATCAGCCTCTGTGGATAGTGTTCAAGCGTGATATGGTGATCACTTTGAAGCAAGAGCTCATTGTGAACAGCTTTAAGACGATTGATGGTCGTGGTGTAAACGTTCGTATTGCTTATGGGGCTTGCATTACGATTCAGTTCGTTACGAACGTCATTATCCACGGCCTCCACATTCACGATTGCAAGCCGACTGGCAATGCGATGGTGAGAAGCTCGCCTAGCCATTACGGGTGGAGGACGATGGCCGATGGGGATGCTATTTCCATCTTTGGGTCGAGTCATATTTGGATCGACCACAACTCTCTCTCCAATTGTGCCGATGGCCTAGTTGACGCTGTCATGGGTTCTACTGCCATTACCATTTCGAACAACTACTTCACTCACCACAACGAGGTAATATTACTGGGTCATAGTGACTCCTATACAAGGGACAAGCAAATGCAAGTGACAATTGCCTACAATCATTTTGGAGAGGGTCTCATCCAGAGAATGCCAAGGTGTAGGCATGGATATTTTCATGTTGTAAACAACGACTACACACACTGGGAAATGTATGCCATTGGTGGTAGTGCTGATCCCACAATTAACAGCCAGGGGAATAGATACCTTGCACCCACAAACCCTTTTGCAAAAGAGGTTACAAAGAGGGTCGATACGAACACATATCAATGGAGACACTGGAATTGGAGATCAGAAGGAGACCTGTTGCTAAATGGAGCCTTCTTCATTCCATCAGGAACTGGGGTCGGAGCAAGTTATGCAAGAGCATCCAGTTTGGGAGCCAAGTCGTCCTCCTTGGTCGCCTCCATCACCTCCGGTGCAGGTGCTCTTTCTTGTCGCCGAGGCTACCAGTGT | 1101 | 49.23 | IRNSTERRNLGFFSCGTGNPIDDCWRCDSRWQMRRKHLADCGIGFGRNAIGGRDGRFYVVSDSGDDDPVNPRPGTLRHAVIQDQPLWIVFKRDMVITLKQELIVNSFKTIDGRGVNVRIAYGACITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVILLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRYLAPTNPFAKEVTKRVDTNTYQWRHWNWRSEGDLLLNGAFFIPSGTGVGASYARASSLGAKSSSLVASITSGAGALSCRRGYQC | 367 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6572920 | 6574273 | + | Bpe026224 | Bpe09g00408 | 108808 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe09g00408 | 367 | SUPERFAMILY | Pectin lyase-like | 4 | 362 | IPR011050 | - | |
Bpe09g00408 | 367 | Pfam | Pectate lyase | 100 | 282 | IPR002022 | - | |
Bpe09g00408 | 367 | PANTHER | PECTATE LYASE | 3 | 364 | - | - | |
Bpe09g00408 | 367 | PANTHER | PECTATE LYASE 18-RELATED | 3 | 364 | IPR045032 | GO:0030570 | |
Bpe09g00408 | 367 | Gene3D | - | 18 | 360 | IPR012334 | - | |
Bpe09g00408 | 367 | SMART | amb_all | 93 | 290 | IPR002022 | - | |
Bpe09g00408 | 367 | PRINTS | Pollen allergen Amb family signature | 41 | 58 | IPR018082 | - | |
Bpe09g00408 | 367 | PRINTS | Pollen allergen Amb family signature | 245 | 264 | IPR018082 | - | |
Bpe09g00408 | 367 | PRINTS | Pollen allergen Amb family signature | 309 | 333 | IPR018082 | - | |
Bpe09g00408 | 367 | PRINTS | Pollen allergen Amb family signature | 267 | 286 | IPR018082 | - | |
Bpe09g00408 | 367 | PRINTS | Pollen allergen Amb family signature | 165 | 186 | IPR018082 | - | |
Bpe09g00408 | 367 | PRINTS | Pollen allergen Amb family signature | 338 | 361 | IPR018082 | - | |
Bpe09g00408 | 367 | PRINTS | Pollen allergen Amb family signature | 65 | 90 | IPR018082 | - | |
Bpe09g00408 | 367 | PRINTS | Pollen allergen Amb family signature | 101 | 117 | IPR018082 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00950 | Bpe-Chr2:8589691 | Bpe09g00408 | Bpe-Chr9:6572920 | 1.97E-149 | dispersed | |
Bpe04g01058 | Bpe-Chr4:7873781 | Bpe09g00408 | Bpe-Chr9:6572920 | 0 | dispersed | |
Bpe04g01900 | Bpe-Chr4:23991902 | Bpe09g00408 | Bpe-Chr9:6572920 | 8.80E-176 | dispersed | |
Bpe09g00408 | Bpe-Chr9:6572920 | Bpe14g01295 | Bpe-Chr14:9892444 | 0 | dispersed | |
Bpe09g00408 | Bpe-Chr9:6572920 | Bpe08g00306 | Bpe-Chr8:1832348 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe09g00408 | K01728 | - | mnt:21398282 | 718.768 |