Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00448 ATGCCAACCGAGAGCTCATCATTTGCCGGAAAAACAGTTTGCGTCACCGGCGCAGGAGGGTTCATTGCGTCTTGGATCGTGAAGCTTCTCCTCGAAAGAGGTTATATTGTTCGGGGAACTGTCAGAAATCCAGATGATCCTAAGAATGCACATCTAAAAGAACTTGAAGGAGCCAAGGACAGGTTAACTTTGCACAAAGCTGATCTTCTCGATTACGAGAGCCTTAGAAATGCTATCGCAGGTTGTGACGGTGTGTTCCATACGGCCTCGCCGATGACGGACGATCCAGAACAAATGCTTGGACCTGCTATTAATGGTTCCAAATATGTGATCGTCGCAGCTGCCGAAACAAACGTGCAGCGTGTAGTGTTCACATCATCCATTGGTGCAGTGTACATGGATCCTAATCGGAGCGCTGACGTAGTCGTCGATGAAAGTTGCTGGAGTGATCTTGAGTTTTGCCAAAACACCAAGAATTGGTATTGTTATGGAAAAACAGTGGCAGAAAAAGCAGCGTGGGAAGAGGCAAAGGAGAGGGGGGTAGATCTACTGGTGATGAATCCCGTGCTAGTAATTGGACCGTTGCTTCAATCCACAATTAATGCAAGCACAATTCATATTCTCAAGTACTTAACTGGCTCAGCCAAAACATTTGCCAATTCCATTCAAGGGTATGTTCATGTTAAAGATGCAGCTTTGGCCCACATTATTGTCTTCGAGACTCCGTCCACCTTCGGTCGTTACCTTTGTGCCGAAAGCATACTTCACCGGGAGGAGGTGGTTGGAATCCTAGCCAAGCTCTTTCCAGAATATCCCATCCCTCTTAAGTGCTCGGACGAGGTGAATCCAAGGAAGAAGCCATACAAGTTCTCTAATCAAAAGCTTAAAGATTTAGGTCTGGAGTTCACACCAGCAAAACAATGCTTATATGACGCAGTCAAGAGCTTACAAGAGAAGGGGCATCTTCCTCTTCCTTAA 978 46.11 MPTESSSFAGKTVCVTGAGGFIASWIVKLLLERGYIVRGTVRNPDDPKNAHLKELEGAKDRLTLHKADLLDYESLRNAIAGCDGVFHTASPMTDDPEQMLGPAINGSKYVIVAAAETNVQRVVFTSSIGAVYMDPNRSADVVVDESCWSDLEFCQNTKNWYCYGKTVAEKAAWEEAKERGVDLLVMNPVLVIGPLLQSTINASTIHILKYLTGSAKTFANSIQGYVHVKDAALAHIIVFETPSTFGRYLCAESILHREEVVGILAKLFPEYPIPLKCSDEVNPRKKPYKFSNQKLKDLGLEFTPAKQCLYDAVKSLQEKGHLPLP 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11853178 11854992 + Bpe024155.1 Bpe09g00448 108848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00448 325 Pfam NAD dependent epimerase/dehydratase family 13 243 IPR001509 -
Bpe09g00448 325 PANTHER CINNAMOYL-COA REDUCTASE 9 323 - -
Bpe09g00448 325 Gene3D - 3 325 - -
Bpe09g00448 325 CDD FR_SDR_e 13 300 - -
Bpe09g00448 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 317 IPR036291 -
Bpe09g00448 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 323 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00291 Bpe-Chr2:1920389 Bpe09g00448 Bpe-Chr9:11853178 3.96E-86 dispersed
Bpe06g00678 Bpe-Chr6:17409383 Bpe09g00448 Bpe-Chr9:11853178 0 dispersed
Bpe08g01405 Bpe-Chr8:14934280 Bpe09g00448 Bpe-Chr9:11853178 8.42E-86 dispersed
Bpe09g00448 Bpe-Chr9:11853178 Bpe10g00596 Bpe-Chr10:12867041 0 dispersed
Bpe11g01699 Bpe-Chr11:13265800 Bpe09g00448 Bpe-Chr9:11853178 6.26E-64 dispersed
Bpe09g00447 Bpe-Chr9:11844856 Bpe09g00448 Bpe-Chr9:11853178 1.14E-48 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00448 K09753 - tcc:18595421 548.125