Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00463 ATGGCTGCCAGTGCGGAAGTTAATGAGTTCATATTCCGGTCAAAACTCCCCGATATTCACATCCCGAACGATCTCCCTCTGCATGCTTTCTGCTTCGAGAAAATATCAGAGGTTGGCTCTCGGCCGTGTCTGATCAATGGCTCTAACGGAGATATATTCACGTACGATGATGTTCGGCTAATGGCGAGAAAAGTGGCGGTGGGGCTTAAAAGCCTCGGCGTCGGAAAAGGAGACGTTATCATGCTTTTGCTTCCCAACTCCCCGGAGTTTGTGTTTTCCTTCCTTGGTGCTTCGTACGGTGGAGCTATAATGACCGCTGCAAATCCGTTTTTCACTGCAGCGGAGATTGCCAAGCAAGCTAAAGCTTCAAAAGCAAAGATCGTTATAACCCAAGCTTGCTACTACGAGAAAGTGAAAGACCTAGCCGGAGTAAATATCATCTGCACCGACTCACCTCCGGAAGGGTGTTTTCATTTCTCCGAGCTCACTAAGTCCGACGAGGAAAACACTCCGGTGGTGGAAATATTCCCAGACGACGTCGTAGCGCTTCCGTATTCATCTGGAACAACTGGTTTGCCCAAAGGTGTGATGTTGACCCATAAAGGGCTAGTGACGAGCGTAAGTCAGCAGGTCGACGGAGACAATCCGAACCTGTACTACGGAAGAGACGACGTCATTCTCTGTGTTTTACCTCTCTTCCACATATATTCTCTCAACTCCGTTTTGCTCTGCGCGTTGAGATCGGGAGCTACGATCTTGATAATGCAGAAGTTTGAGATCAAATCCCTTCTGAATTTGATTCAGAAGTATAAGGTTTCGGTGGCACCGATCGTGCCGCCGATTGTTTTGGCAATAGCAAAGTCGCCGGAGCTCGAGAACTACGATCTTTCGTCGATAAGGGTGCTGAAATCGGGCGGCGCCCCGCTGGGGAAGGAGCTCGAGGATACGGTGAGAGCCAAATTTCCGAAAGCGGTGCTTGGTCAGGGTTACGGAATGACTGAGGCAGGTCCAGTTCTAACAATGAGCCTAGCCTTCGCGAAGTACCCATCACCAGTAAAGCCAGGTGCTTGCGGTACTGTCATCCGGAACGCCGAGCTGAAGGTACTTGACATAGAAACCGGCGCATCTCTGCCGCGCAACGTCCGTGGAGAGATCTGTATCAGAGGACACCAGATCATGAAAGGCTACCTGAACGATCCAGAAGCCACTGACAGGACAATCGACGAACAAGGTTGGCTTCACACCGGCGACATAGGGTTCGTCGACGAAGACGACGAGCTCTTCATAGTCGACAGACTAAAGGAGCTGATCAAATACAAAGGGTTTCAGGTGGCTCCGGCGGAGATTGAGGCCATTCTGCTCACTCACCCTCGAGTCTCCGACGCTGCCGTCGTACCAATGAAAGATGAACAAGCTGGAGAGGTTCCTGTTGCATTTGTAGTGACAGCAAAGAATTGCGAGCTCACTGAAGATGAAGTAAAACAGTTCATCTCGAAACAGGTGGTATTCTACAAGAGACTGAACAGAGTGTTCTTCATTGACGCGATTCCGAAGGCCCCCTCTGGCAAGATCTTGAGGAAAAACTTGAAAGCCATTTTAGAAAATGGCCTACCCAATTAG 1620 49.88 MAASAEVNEFIFRSKLPDIHIPNDLPLHAFCFEKISEVGSRPCLINGSNGDIFTYDDVRLMARKVAVGLKSLGVGKGDVIMLLLPNSPEFVFSFLGASYGGAIMTAANPFFTAAEIAKQAKASKAKIVITQACYYEKVKDLAGVNIICTDSPPEGCFHFSELTKSDEENTPVVEIFPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVSQQVDGDNPNLYYGRDDVILCVLPLFHIYSLNSVLLCALRSGATILIMQKFEIKSLLNLIQKYKVSVAPIVPPIVLAIAKSPELENYDLSSIRVLKSGGAPLGKELEDTVRAKFPKAVLGQGYGMTEAGPVLTMSLAFAKYPSPVKPGACGTVIRNAELKVLDIETGASLPRNVRGEICIRGHQIMKGYLNDPEATDRTIDEQGWLHTGDIGFVDEDDELFIVDRLKELIKYKGFQVAPAEIEAILLTHPRVSDAAVVPMKDEQAGEVPVAFVVTAKNCELTEDEVKQFISKQVVFYKRLNRVFFIDAIPKAPSGKILRKNLKAILENGLPN 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 12619951 12622677 + Bpe024171.1 Bpe09g00463 108863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00463 539 Pfam AMP-binding enzyme 39 439 IPR000873 -
Bpe09g00463 539 ProSitePatterns Putative AMP-binding domain signature. 183 194 IPR020845 -
Bpe09g00463 539 CDD 4CL 21 529 - -
Bpe09g00463 539 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 6 533 - -
Bpe09g00463 539 Pfam AMP-binding enzyme C-terminal domain 448 523 IPR025110 -
Bpe09g00463 539 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 533 - -
Bpe09g00463 539 Gene3D - 5 433 IPR042099 -
Bpe09g00463 539 SUPERFAMILY Acetyl-CoA synthetase-like 7 535 - -
Bpe09g00463 539 Gene3D - 434 536 IPR045851 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00686 Bpe-Chr1:4992698 Bpe09g00463 Bpe-Chr9:12619951 0 dispersed
Bpe02g02090 Bpe-Chr2:22385872 Bpe09g00463 Bpe-Chr9:12619951 0 dispersed
Bpe04g01221 Bpe-Chr4:17441406 Bpe09g00463 Bpe-Chr9:12619951 0 dispersed
Bpe09g00463 Bpe-Chr9:12619951 Bpe11g00825 Bpe-Chr11:6153213 9.87E-137 dispersed
Bpe13g00207 Bpe-Chr13:10124954 Bpe09g00463 Bpe-Chr9:12619951 3.08E-107 dispersed
Bpe10g00762 Bpe-Chr10:13875466 Bpe09g00463 Bpe-Chr9:12619951 3.14E-132 transposed
Bpe10g00580 Bpe-Chr10:12764074 Bpe09g00463 Bpe-Chr9:12619951 0 wgd
Bpe06g00659 Bpe-Chr6:17301514 Bpe09g00463 Bpe-Chr9:12619951 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00463 K01904 - jre:108986343 836.254