Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00477 ATGAGCAACCTCACTGTTGAATCTCCGACAAACGATAAAGCCGTTTCAGATTGTGAAGAAGAAGAATCAAATTGTTTTGACGATAACAAATTCAATTCTAGGAGCTCTTATCAGTCCAAGCCCCACAGAGGCAACGATATTCGATGGGAGGTGATTCGACGGACGAAAGCAAAAGATGGAGATTTAAACTTCGGCCATTTCAGGCTTTTGAAGAAGCTTGGATTTGGAGACATTGGAAGTGTGTATCTGGCAGAACTGAGAGGAATACGCTGCCTTTTTGCCATGAAGGTTATGGACAAAAGGATGCTGATTGAGAGGAGGAAGGGGGGTAGAGCACAAACTGAGAGAGACATACTGGGTTTGCTAGATCATCCTTTTCTACCAACCCTTTACTCCCATTTCGAAACCGACAAATTTTCTTGCTTGTTAATGGAGTTTTGCAGTGGTGGGGATCTTCACACGCTCAGGCAACGCCAGCCTTCCAAGCATTTTTCAGAGCAAGCGGCCAGGTTTTACGCCTCGGAAGTTCTTCTTGCTCTGGAGTATCTTCACATGATGGGGGTTGTTTACAGAGACTTGAAGCCAGAAAATGTGTTAGTCAGAGAAGATGGTCACATCATGCTTTCAGATTTTGATTTATCATTGCAATGCTACGTTAATCCAACTCTCGTTCAATCCAATCCAGCCTCCGCTTGCGCAATTTCCGCAGCCTGCAAATTACCCATTTGCGTCCACCCATCTTCCTGCCTGCAACCTTCTTGCTTGAAGCCTATCACATTTCTCAAATCAAACAAGACAAAACGTGATCATAAAATTATCAGCTTTTCACATTCAGACTCGCTCCCCCAACTCATAGCCGAGCCTACTTCAGCTAGATCAACGTCTTTTGTCGGAACCCATGAGTACTTGGCTCCGGAGATTATCCGAGGAGATGGCCATGGCAGCGCAGTAGATTGGTGGACCTTTGGGATCTTCTTGTACGAATTATTACATGGCAAAACGCCATTCAAAGGGAATGGAAATAGAGAAACCTTGTTCAACGTGATTGGGCAGTCCCTCAAATTTCCAGAAGGGAACAATATAAGCTATGCTGCTAAAGATTTGATCAGAACTTTGGTGGAGAAGGACCCGCAAAAGCGGCTGGGGTTCAAAAGGGGCGCGGCGGAGATAAAACAGCATCCATTTTTTCACGGCGTGAACTGGGCTCTCATTCGCAGTTCTTCCCCTCCTGAAATTCCGAGACCAGTTCATCTTCCATTGTTGAATCTCAAGCTGAAATCTCCTTCCCCTCTTCCGTCCAACGACAGCAAGGCAGCATCCGATTCAGACAGCTCCTCCTCGAGTTCTTACTTAGAATTTGAGTTTTTCTAG 1371 45.44 MSNLTVESPTNDKAVSDCEEEESNCFDDNKFNSRSSYQSKPHRGNDIRWEVIRRTKAKDGDLNFGHFRLLKKLGFGDIGSVYLAELRGIRCLFAMKVMDKRMLIERRKGGRAQTERDILGLLDHPFLPTLYSHFETDKFSCLLMEFCSGGDLHTLRQRQPSKHFSEQAARFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLQCYVNPTLVQSNPASACAISAACKLPICVHPSSCLQPSCLKPITFLKSNKTKRDHKIISFSHSDSLPQLIAEPTSARSTSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLHGKTPFKGNGNRETLFNVIGQSLKFPEGNNISYAAKDLIRTLVEKDPQKRLGFKRGAAEIKQHPFFHGVNWALIRSSSPPEIPRPVHLPLLNLKLKSPSPLPSNDSKAASDSDSSSSSSYLEFEFF 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13195994 13197450 + Bpe024184.1 Bpe09g00477 108877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00477 456 PANTHER FLIPPASE KINASE 1-RELATED 12 456 - -
Bpe09g00477 456 MobiDBLite consensus disorder prediction 1 42 - -
Bpe09g00477 456 CDD STKc_phototropin_like 66 415 - -
Bpe09g00477 456 MobiDBLite consensus disorder prediction 427 456 - -
Bpe09g00477 456 SMART serkin_6 67 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00477 456 Gene3D Transferase(Phosphotransferase) domain 1 289 413 - -
Bpe09g00477 456 Pfam Protein kinase domain 267 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00477 456 Pfam Protein kinase domain 68 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00477 456 SUPERFAMILY Protein kinase-like (PK-like) 41 429 IPR011009 -
Bpe09g00477 456 MobiDBLite consensus disorder prediction 13 28 - -
Bpe09g00477 456 PANTHER PROTEIN KINASE 12 456 - -
Bpe09g00477 456 Gene3D Transferase(Phosphotransferase) domain 1 147 216 - -
Bpe09g00477 456 ProSiteProfiles Protein kinase domain profile. 67 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00477 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Bpe09g00477 456 Gene3D Phosphorylase Kinase; domain 1 66 146 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00477 Bpe-Chr9:13195994 Bpe11g01016 Bpe-Chr11:7560216 0 dispersed
Bpe09g00477 Bpe-Chr9:13195994 Bpe02g01037 Bpe-Chr2:11063600 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63510 PF00069 Pkinase 4.20E-37 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00477 K08286 - qsu:112027816 634.409