Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00480 ATGTCCGTCTTACCCATGTCGTTTAACATGAAGATCTACTTCTACTTCTTCGTCTGCTCCGCTTTATTTCTTCTGTATTTCGCTTCTTCTTGTTCAGGGGCAGATGAGGACGACGTGAGGTGCCTTCAGGGGATTAAGAATTCGCTCAACGATCCTCAGGGGACTTTTAGGTCATGGAACTTCGGCAACACTACCGTTGGTTTCATCTGCAATTTCGTCGGCGTTACCTGCTGGAACGATCGCGAGAATCGTGTAATTAGTCTCGAACTGCGGGGCAGGAAGCTGTCTGGCTTGATTCCCACGGATTTTCAGTATTGTACAAACCTGCAAAACTTGTACCTTTCCGATAACGACTTCTCAGGTTCGATTCCATCTGAGATTTGCTCGTGGTTGATGTTCCTGGTGACTCTGGATTTGTCCAACAATGGTTTTTCAGGCTCCATACCTCCCGATCTAGCCAAGTGTTCCTATTTGAACAAGTTGATTTTGTCGGGTAATCGTCTGTCGGGCTCAATTCCTTATGAACTTTCTAGTCTGAGTAGGCTTAATAAGTTTTCTGTGGCGAATAACGAACTTAGTGGAGCGATTCCTTCGTTTTTCTCCAAGTTTGGGAAGGCTGATTTTGAAGGGAATAGCGGCCTTTGTGGGGAGCCTCTTGGATCAAAGTGTGGTGGTTTGAGCACGAAGAATCTCGCCATTATTATCGCAGCTGGAGTGTTTGGCGCTGCTGCTTCGTTGGTGCTTGGTTTTGGGCTATGGTGGTGGTGCCATTTGAGGTCAAGCAAGAGGAAGAAGGGGAGATTTGGGACTGGAAGAGATGATGATTGGGCTGTAAGATTGAGGGCTTATAAGCTTGTTCAAGTTTCATTGTTTCAGAAACCTTTAGTCAAAGTTAAGTTAGCTGATTTAATGGCAGCGACAAACAATTTCAGCTCGGAAAACATCATTGTTTCAACCAGAACAGGAACTACTTATAAGGCAATTCTTCCTGATGGATCTGCCCTCGCGATCAAGCGTCTCAGCACTTGTAAGTTCAGCGAGAGGCAGTTTCAAGTGGAGATGAACAGATTAGGACAGATAAAGCACCCAAATTTGACACCCCTTTTGGGGTTTTGTCTTGTGGAAGATGAAAAGCTGTTAGTTTATAAGCATATGTCAAATGGGACACTCTACTCTTTGTTGCATACAACCAATACTTCGTTGGACTGGCCAACGCGATTTAGGATTGGCATTGGAGCGGCGAGGGGGCTTTGCTGGCTCCACCATGGATGCCAACCTCCATATATGCATCAAAATATATGCTCCAGTGTAATTCTCATAGATGAAGAGTATGATGCAAGAATTATGGATTATGGGTTGGCAAAATTAATGGCTACTGATTCAATTGAGAGTAGCTTTGTCACGGGAGACTTGGGAGAACTCGGCTATGTTGCCCCGGAATACCCGAGTACTTTGGTTGCATCGCTTAAAGGAGATGTCTATGGATTTGGAGTGGTTCTGTTAGAGTTGGTGACGGGGCAAAAACCTCTAGAAGTGAGCAATGGGGAGGAAGGATATAAGGGTAACTTGGTGGATTGGGTCAATCAGCATATTTCTTTGGGTCAGATTAAGGATTGCATTGACAAAAATCTTTGTGGGAAGGGGAATGAGGAGGAAATTTTACAGTTTCTGAAAATCGCTTGTAATTGCGTGGTTTCTCAACCCAAGGAAAGGTGGTCGATGGACCGGGTTTATCAAGTGTTGAAGAGTATGGCTAGAGGATGTAGTTTCTCTGAGTTGGACGATGAATTTCCGATGGCGTTTGGAAGGTGA 1812 44.81 MSVLPMSFNMKIYFYFFVCSALFLLYFASSCSGADEDDVRCLQGIKNSLNDPQGTFRSWNFGNTTVGFICNFVGVTCWNDRENRVISLELRGRKLSGLIPTDFQYCTNLQNLYLSDNDFSGSIPSEICSWLMFLVTLDLSNNGFSGSIPPDLAKCSYLNKLILSGNRLSGSIPYELSSLSRLNKFSVANNELSGAIPSFFSKFGKADFEGNSGLCGEPLGSKCGGLSTKNLAIIIAAGVFGAAASLVLGFGLWWWCHLRSSKRKKGRFGTGRDDDWAVRLRAYKLVQVSLFQKPLVKVKLADLMAATNNFSSENIIVSTRTGTTYKAILPDGSALAIKRLSTCKFSERQFQVEMNRLGQIKHPNLTPLLGFCLVEDEKLLVYKHMSNGTLYSLLHTTNTSLDWPTRFRIGIGAARGLCWLHHGCQPPYMHQNICSSVILIDEEYDARIMDYGLAKLMATDSIESSFVTGDLGELGYVAPEYPSTLVASLKGDVYGFGVVLLELVTGQKPLEVSNGEEGYKGNLVDWVNQHISLGQIKDCIDKNLCGKGNEEEILQFLKIACNCVVSQPKERWSMDRVYQVLKSMARGCSFSELDDEFPMAFGR 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13214635 13216446 - Bpe024187.1 Bpe09g00480 108880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00480 603 SUPERFAMILY Protein kinase-like (PK-like) 287 581 IPR011009 -
Bpe09g00480 603 ProSiteProfiles Protein kinase domain profile. 310 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe09g00480 603 Gene3D Ribonuclease Inhibitor 35 225 IPR032675 -
Bpe09g00480 603 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Bpe09g00480 603 SUPERFAMILY L domain-like 35 211 - -
Bpe09g00480 603 PANTHER RECEPTOR-LIKE PROTEIN 55 22 600 - -
Bpe09g00480 603 Pfam Protein tyrosine and serine/threonine kinase 332 579 IPR001245 GO:0004672|GO:0006468
Bpe09g00480 603 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 22 600 - -
Bpe09g00480 603 Gene3D Transferase(Phosphotransferase) domain 1 385 595 - -
Bpe09g00480 603 Gene3D Phosphorylase Kinase; domain 1 271 384 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00346 Bpe-Chr6:14988060 Bpe09g00480 Bpe-Chr9:13214635 1.16E-139 dispersed
Bpe09g00480 Bpe-Chr9:13214635 Bpe03g00294 Bpe-Chr3:3991704 9.85E-08 dispersed
Bpe10g00018 Bpe-Chr10:295617 Bpe09g00480 Bpe-Chr9:13214635 2.18E-37 dispersed
Bpe13g00141 Bpe-Chr13:8793372 Bpe09g00480 Bpe-Chr9:13214635 8.08E-37 dispersed
Bpe09g00480 Bpe-Chr9:13214635 Bpe10g00974 Bpe-Chr10:15211628 5.55E-07 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63511 PF07714 PK_Tyr_Ser-Thr 4.20E-27 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00480 - - csv:101209638 872.463