Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00487 ATGAATAGAATAATTTCCACGCCGGCGTCTAAGTTCCGCCATCTCCAGCGACGCATCATCAAGCACACCTCCTCTGCCGCTGCTGCCGCCAACGACGACGAGCATCCCCACTACCTTCTATGGCGCTACCAAATTCTCGATCCAGGAAGCGACATTGTAGCCCATTGGAACCACATTTTCCTCGTTACGTGTCTCATCGCCCTCTTCATCGATCCTCTTTATTTCTATCTTCCTTCCGTTGGGGGTCCTGGCTGTCTCAAAACAGATACCAGTTTAGGAATCGTCGTCACCTTCTTCCGTACGGTGACCGATCTTTTCTACCTCCTGCATATGATTATGAAATTTCGTACGGCGTTTGTCGCTCCCAGTTCTAGGGTTTTCGGAAGGGGCGAATTGGTTATGGATGCAAGAGAAATTGCAATTAGGTACTTGAAATCAGATTTTGTGATTGATCTTGCCGCAACGCTTCCTCTCCCACAAATTGTCATCTGGTTAGTGATTCCAGCAATAAGACGCTCCAGAGCTGATCATGCTAACAACACTCTATCTCTTTTTGTTCTTATACAATACGTCCCGAGGCTATTTCTCATCTTTCCTTTAAACCAGAGAATTATTAAAACTACCGGAGTTATCACAAAAACAGCCTGGGCAGGAGCTGCATATAATCTCATTCTTTACATGCTTGCCAGCCATGTTTTAGGAGCTACATGGTATCTGCTTTCCATCGGTCGTCAATTCTCCTGCTGGAAATCGGAGTGTGCAAAGGAGAATGCTTCCAAAGTTTTGTCTTGTATCCCTAGTTTTCTAGATTGTTCTAGTTTGGAACTGCCCATAAGGCAATATTGGCTCAACGTCACTCAAGTCACTGCGAGATGTGATCCTAAGAACGAAAATGTCAAATTCAAGTTCGGAATGTTTGCCGATGCCTTCATCAATGACGTTGCCACTTCACACTTTATTGAAAAGTACCTCTACAGTCTCTGGTGGGGCTTAAGGAGCTTAAGTTCGTATGGGCAAACTTTGGACACAACTACTTTCATCGGAGAGACAACATTTTGCATTTTCATATGTATTGCTGGCTTGATTCTTTTTGCACAATTGATTGGTAACATGCAGACATATTTGCAATCAATGAACGTTAGAGTTGAAGAATGGAGGGTAAAGCGAAGAGATACAGAAGAATGGATGAGACACCGTCAGTTGCCACAGGACTTGCAGGAACGTGTTCGTCGCTTTGTCCATTATAAATGGCTTGCTGCAAGAGGAGTCAATGAAGAATCTATCCTGCAATCTTTACCTCCTGATCTTCGCCGTGAGATTCAGCGCCATTTGTGCCTCTCCCTTGTTCGTCGTGTCCCTTTCTTCTCCCAAATGGATGACCAGCTCATCGACGCCATATGTGAGCGTCTCGTCTCATCTTTAAGTACCCAAGGGACCTACATCGTTCGGGAGGGTGATCCAGTAAATGAAATGCTATTCGTGATAAGAGGTCAGCTGGAGAGCTCCACCACTAATGGAGGTAGATCGGGCTTCTTCAACTCCATCACTCTAAGACCTGGCGACTTCTGTGGAGAGGAATTGCTGACTTGGGCATTAATGCCGAGTTCAAGCTTAAACCTCCCTTCTTCTACTCGCACTGTCAAAGCTCTTACTGAGGTTGAAGCTTTCACCCTCCATGCCGAAGACCTTAAATTTGTTGCAAGCCAGTTTAAGCGGCTTCACAGCAAGAAACTTCAGCATGCATTTAGATACTATTCCCATCAATGGAGGACATGGGGGGCTTGTTTTATACAGGCTGCCTGGAGGCGATTTCGGAAGAGGAAAATGGCCAAAGATCTAGCAATGCGAGAGAGCCTTTCCTACTTGCTATATAACGCGCAAACTAGTTATTACGACAATGAGGTTGGAGATGGAAGATATGAAAATGAGGAAGATGATAATCTGTCAATGGATAATTCAAACAACGCACAGCATCTTGGAGCCACCATTCTTGCTTCAAAATTCGCTGCAAATACAAAAAGAGGGTCTCACCAGAAAGTGGAACCAGGCAACCCGGCTTCTGCGAGCTTGAAGATGCCCAAGTTATTCAAGCCAGATGAACCTGATTTCTCTCTTGACCATGAAGATATTTAG 2133 45.01 MNRIISTPASKFRHLQRRIIKHTSSAAAAANDDEHPHYLLWRYQILDPGSDIVAHWNHIFLVTCLIALFIDPLYFYLPSVGGPGCLKTDTSLGIVVTFFRTVTDLFYLLHMIMKFRTAFVAPSSRVFGRGELVMDAREIAIRYLKSDFVIDLAATLPLPQIVIWLVIPAIRRSRADHANNTLSLFVLIQYVPRLFLIFPLNQRIIKTTGVITKTAWAGAAYNLILYMLASHVLGATWYLLSIGRQFSCWKSECAKENASKVLSCIPSFLDCSSLELPIRQYWLNVTQVTARCDPKNENVKFKFGMFADAFINDVATSHFIEKYLYSLWWGLRSLSSYGQTLDTTTFIGETTFCIFICIAGLILFAQLIGNMQTYLQSMNVRVEEWRVKRRDTEEWMRHRQLPQDLQERVRRFVHYKWLAARGVNEESILQSLPPDLRREIQRHLCLSLVRRVPFFSQMDDQLIDAICERLVSSLSTQGTYIVREGDPVNEMLFVIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPSSSLNLPSSTRTVKALTEVEAFTLHAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGACFIQAAWRRFRKRKMAKDLAMRESLSYLLYNAQTSYYDNEVGDGRYENEEDDNLSMDNSNNAQHLGATILASKFAANTKRGSHQKVEPGNPASASLKMPKLFKPDEPDFSLDHEDI 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13357648 13361069 + Bpe024197.1 Bpe09g00487 108887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00487 710 SUPERFAMILY Voltage-gated potassium channels 48 376 - -
Bpe09g00487 710 SUPERFAMILY cAMP-binding domain-like 383 579 IPR018490 -
Bpe09g00487 710 SMART cnmp_10 454 585 IPR000595 -
Bpe09g00487 710 Gene3D - 59 376 - -
Bpe09g00487 710 MobiDBLite consensus disorder prediction 672 710 - -
Bpe09g00487 710 ProSiteProfiles cAMP/cGMP binding motif profile. 454 584 IPR000595 -
Bpe09g00487 710 Gene3D Jelly Rolls 452 572 IPR014710 -
Bpe09g00487 710 Gene3D Helix hairpin bin 377 445 - -
Bpe09g00487 710 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 33 705 - -
Bpe09g00487 710 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 33 705 - -
Bpe09g00487 710 CDD CAP_ED 454 585 IPR000595 -
Bpe09g00487 710 Pfam Ion transport protein 56 382 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe09g00487 710 MobiDBLite consensus disorder prediction 695 710 - -
Bpe09g00487 710 Pfam Cyclic nucleotide-binding domain 477 564 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00224 Bpe-Chr2:1549514 Bpe09g00487 Bpe-Chr9:13357648 0 dispersed
Bpe09g00487 Bpe-Chr9:13357648 Bpe12g00588 Bpe-Chr12:11659486 0 dispersed
Bpe09g00487 Bpe-Chr9:13357648 Bpe12g00381 Bpe-Chr12:9134036 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00487 K05391 - mnt:21391781 1163.29