Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00488 ATGAGGATGGAAGACGCTTCGAGTGGGCGACCTTTTTTTAGCTCTCCAGGCTATCTGTTCGATGAGGACTACTGTGAAGAACAGTTACCGGACAAGAAGCGCCGCCTCACTCAGGAGCAGGTAATTCTTCTGGAAGAGAGCTTTGAGGCAGAAAACAAACTGGAGCCAGACCGAAAGACCCAATTGGCAAAGAAACTTGGGCTGCAGCCAAGGCAAATTGCCGTTTGGTTTCAGAACCGCCGCGCTCGCTGGAAGACAAAGCAGCTTGAAAGGGAGTATGGTGTTCTCAAATCTACATATAATTCGCTTCTTTCCAATTATGACTCCATTGTCGAAGAGAACGAAAAGCTCAAATTTGAGGTTGTTTCCTTATCTGACAAACTTGATGCAAAAGAGGGGGCTGGAATTCCAATTCCGGCTAAAAAATCTGATTCTTCATCGGCAGATGTCACGCCCGTCTATTCCTTCCGATTTGGCATTAAGTTGGAAGATGGGTTGAGCTCTGGAACAGGTGGAAGTGGGGTGGTGGATGATCCTCAACTTCTAGACAGTGGTAATTCTTATTTCCTGAGCAATGAGTACCCAGTTATGGATGGGATGCATTCCGGGGAAGATGACCGTAGTGACGATACCCAGAGTTACTTCCCTGATGTCTTTCAGCAAAACCATGAGGAGTTAGCAACAATTTGTTGGTGGGACTGGTCTTGA 708 46.75 MRMEDASSGRPFFSSPGYLFDEDYCEEQLPDKKRRLTQEQVILLEESFEAENKLEPDRKTQLAKKLGLQPRQIAVWFQNRRARWKTKQLEREYGVLKSTYNSLLSNYDSIVEENEKLKFEVVSLSDKLDAKEGAGIPIPAKKSDSSSADVTPVYSFRFGIKLEDGLSSGTGGSGVVDDPQLLDSGNSYFLSNEYPVMDGMHSGEDDRSDDTQSYFPDVFQQNHEELATICWWDWS 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13362619 13364120 - Bpe024198.1 Bpe09g00488 108888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00488 235 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 3 221 IPR045224 GO:0003700
Bpe09g00488 235 ProSiteProfiles 'Homeobox' domain profile. 27 87 IPR001356 GO:0003677
Bpe09g00488 235 Gene3D - 25 93 - -
Bpe09g00488 235 PRINTS Lambda-repressor HTH signature 58 67 IPR000047 GO:0003677
Bpe09g00488 235 PRINTS Lambda-repressor HTH signature 67 83 IPR000047 GO:0003677
Bpe09g00488 235 Pfam Homeobox associated leucine zipper 87 128 IPR003106 GO:0006355|GO:0043565
Bpe09g00488 235 Pfam Homeodomain 32 85 IPR001356 GO:0003677
Bpe09g00488 235 ProSitePatterns 'Homeobox' domain signature. 62 85 IPR017970 GO:0000981|GO:0006355
Bpe09g00488 235 SUPERFAMILY Homeodomain-like 22 89 IPR009057 -
Bpe09g00488 235 CDD homeodomain 32 88 IPR001356 GO:0003677
Bpe09g00488 235 SMART HOX_1 30 91 IPR001356 GO:0003677
Bpe09g00488 235 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5 3 221 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe09g00488 Bpe11g01552 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00488 Bpe-Chr9:13362619 Bpe13g00467 Bpe-Chr13:12180833 5.11E-42 dispersed
Bpe13g01506 Bpe-Chr13:20488785 Bpe09g00488 Bpe-Chr9:13362619 2.55E-28 dispersed
Bpe11g01552 Bpe-Chr11:11549792 Bpe09g00488 Bpe-Chr9:13362619 5.51E-109 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21882 PF00046 Homeodomain 5.20E-17 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00488 K09338 - mnt:21391788 311.997