Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00492 ATGGAACACCTTGTGGAGCATATGAGAATCTCATATCACTCGGTTCATGAACCCTCATGCGGCGTTTGTCATAAACATTGTAGATCTTTTGAGTCTCTTAGAGAACATCTCATTGGTCCACTGCCAAAACAAGAATGCAAAAACATATTCAGTGTACGAGGTTGCAAGTTCTGCTTATCCATTCTTGATAGCCCTTATGCTTTAAGGGTTCACCAAGATAGGTGTCAACTCTCTGGTGGCCTGCTTGCTCGATTGGCGAACCTTGGTTTTCGAGATAACTTGGGTATGGAGGATGGGAGAACAAAAGGGCCAGACGTCGTGGCATTGGCATGCAAAATGGTTGGTGGCGGCAGTGATTCCTCCATTGATATCTGTGCTAGAGTCTGTCTCATTGATGAAAATGAAACAATACTCTTCCAATCTTATGTGAAACCAATCATCCCTATCACTAACTATAGGTATGAATCAACGGGGATTCGTCCGGAGCATTTGAGGGATGCCATGGGACTGAGGCAAGTGCAGAAGAAAGTTCAAGACTTTCTCTGCAATGGGGAACCCATGTGGAAGATTCGACCCAGGAGTGGAAAAGCAAGGATTCTAGTGGGTCACGGTTTGGATCATGATCTTGATGGTTTGCAAATAGAATATCCATCCCTAATGATCAGAGATACTGCAAAATATCCTCCATTAATGAAAACAAGCAAGCTCAGTAATTCGCTCAAGTACTTGACTCAAGCATATCTAGGGTATGATATTCAGAATGGAATACAAGAACCGTACGAGGATTGTGTCGCAGCCATGAGACTTTACATGAGAATGAGGAGCCAAGCTCACAAGACAGAGAACCACCCATTTCCATCTGACCAACAAAGCAGGAATAATTTTGCAGTATCAAGACAGAATGAGCTCGAGAAGATGACTCCTGAACAGATGCTCGATATTTCAAGGTCTGATTATTACTGTTGGTGCTTGGATTTGAAGGGTTAA 987 43.16 MEHLVEHMRISYHSVHEPSCGVCHKHCRSFESLREHLIGPLPKQECKNIFSVRGCKFCLSILDSPYALRVHQDRCQLSGGLLARLANLGFRDNLGMEDGRTKGPDVVALACKMVGGGSDSSIDICARVCLIDENETILFQSYVKPIIPITNYRYESTGIRPEHLRDAMGLRQVQKKVQDFLCNGEPMWKIRPRSGKARILVGHGLDHDLDGLQIEYPSLMIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYDIQNGIQEPYEDCVAAMRLYMRMRSQAHKTENHPFPSDQQSRNNFAVSRQNELEKMTPEQMLDISRSDYYCWCLDLKG 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13447681 13449104 - Bpe024203.1 Bpe09g00492 108892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00492 328 PANTHER OS02G0709000 PROTEIN 1 325 - -
Bpe09g00492 328 SMART exoiiiendus 105 279 IPR013520 -
Bpe09g00492 328 CDD REX4_like 107 270 IPR037431 GO:0006364|GO:0008408
Bpe09g00492 328 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 1 325 - -
Bpe09g00492 328 SUPERFAMILY Ribonuclease H-like 118 276 IPR012337 -
Bpe09g00492 328 Gene3D - 103 294 IPR036397 GO:0003676
Bpe09g00492 328 Pfam Exonuclease 118 253 IPR013520 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00492 Bpe-Chr9:13447681 Bpe11g00451 Bpe-Chr11:3517824 9.93E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00492 - - qsu:111996861 566.229