Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00504 ATGGAAGAATATTCTCTCCCGGTGGATAGTGATCATAAGGCCACTGTATTCCGGCCATTCTCCATTGCTGCACCTCACATGCGAGCTTTCCACCTTGCATGGTTGTCTCTCTTCTCCTGCTTCTTCTCAACTTTTTCTATCCCTCCTCTCGTCCCCGTCATTCGGGACAACCTGAACCTCACCGATTCTGACCTCAGCACCGCCGGGGTCGCTGCCTTTATAGGCTCCATCTTCTCCCGCCTCGCTATGGGACCCGCGTGTGACCTCGTCGGCCCGCGCGTCGCCTCCGCCACCCTCTCTCTCCTCACCGCCCCGGCGATTCTCGCCACCTCTCTCGCCTCCACGCCGCTTTCCTTCATCCTTGTCCGCTTCCTCGTTGGTTTTTCCCTCGCAAACTTCGTCGCTAACCAGTTCTGGATGAGCTCAATGTTCTCGAGCAACGTCGTCGGGCTCGCTAACGGCGTCTCCGCCGGGTGGGCGAACGCCGGCTCCGGCGTAACCCAACTCATCATGCCGCAAATATACAATCTAATCATCTTCTTCAACGTCCCCTCTTTCACCGCCTGGCGATTTGCTTACATTTTTCCTGCAATATTTCAAGCAGTTACAGCCATAATGGTCTTATCCTTCGGCCAAGATTTACCTTCAGGAAACTACAACCGCTCAAGAGAAGCATCAAAAGAGAGGGTGTCAAAAATTCTCTTCAACGGCCTAATGAATTACAGAGCCTGGATTTTGGCTCTAACTTATGGGTTTTCCTTCGGGGTAGAGCTGACAACTGATAACATAATAGCGCAGTACTTTTACGACAGATTCGAGCTGAATCTTCAAACAGCTGGGACGGTAGCAGCAGGCTTTGGGATGGCAAACTTGTTTTCTCGGCCGCTTGGTGGGTTTGTGTCGGACAAGATGGGGCGGAGGTACGGGATAAGAGGGCGGCTGTGGGCGCTGTGGGTGGTTCAGACGGTGGGGGGATTGCTTTGTGTGATGCTTGGCAGAGCAAGCGCGCTTTGGAGTTCGGTTATGGTGATGTGTTTCTTCTCTGTCTTTGTTCAAGCTGCCGCTGGCCTGACCTTTGGTGTTGTTCCATTTGTTTCAAAAAGGTCGCTAGGAGTGGTGTCGGGGATGACGGGTTGCGGAGGGACAGTAGGAGCAGTGGCGACGCAGCTGCTTCTGTTTACAGGGTCTAAACATTCAAAGCAAACAAGCATTTCACTAATGGGAGTGTTGACGATCCTCTGCACTCTGCCGCTCTGCTTGGTCTACTTCCCTGGATGGGGTGGCATGTTCTGTGGCCCTTCTCCTCCTCCCTCTCTTCTTACCCAACACTATCCTCTTCTTGGTTAA 1347 53.01 MEEYSLPVDSDHKATVFRPFSIAAPHMRAFHLAWLSLFSCFFSTFSIPPLVPVIRDNLNLTDSDLSTAGVAAFIGSIFSRLAMGPACDLVGPRVASATLSLLTAPAILATSLASTPLSFILVRFLVGFSLANFVANQFWMSSMFSSNVVGLANGVSAGWANAGSGVTQLIMPQIYNLIIFFNVPSFTAWRFAYIFPAIFQAVTAIMVLSFGQDLPSGNYNRSREASKERVSKILFNGLMNYRAWILALTYGFSFGVELTTDNIIAQYFYDRFELNLQTAGTVAAGFGMANLFSRPLGGFVSDKMGRRYGIRGRLWALWVVQTVGGLLCVMLGRASALWSSVMVMCFFSVFVQAAAGLTFGVVPFVSKRSLGVVSGMTGCGGTVGAVATQLLLFTGSKHSKQTSISLMGVLTILCTLPLCLVYFPGWGGMFCGPSPPPSLLTQHYPLLG 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 13792292 13794245 + Bpe024219.1 Bpe09g00504 108904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00504 448 Pfam Major Facilitator Superfamily 34 385 IPR011701 GO:0022857|GO:0055085
Bpe09g00504 448 Gene3D MFS general substrate transporter like domains 24 219 IPR036259 -
Bpe09g00504 448 CDD MFS_NRT2_like 30 420 IPR044772 GO:0015112
Bpe09g00504 448 Gene3D MFS general substrate transporter like domains 226 425 IPR036259 -
Bpe09g00504 448 SUPERFAMILY MFS general substrate transporter 23 421 IPR036259 -
Bpe09g00504 448 PANTHER HIGH AFFINITY NITRATE TRANSPORTER 2.7 3 434 - -
Bpe09g00504 448 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 426 IPR020846 GO:0022857
Bpe09g00504 448 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 3 434 IPR044772 GO:0015112
Bpe09g00504 448 ProSitePatterns Sugar transport proteins signature 1. 297 312 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00504 Bpe-Chr9:13792292 Bpe11g01795 Bpe-Chr11:14282622 0 dispersed
Bpe09g00504 Bpe-Chr9:13792292 Bpe10g00849 Bpe-Chr10:14398284 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00504 K02575 - jre:109021642 630.943