Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe09g00547 | ATGCGTAGAAGGAAAAAGAAGAAGAAGAAGGAGAAGCTTCAGTTGGGAAAATCTATGGACTGGGAATGGAGAAAATTTGCTTGGGAGGAAACTGAAAATTTGACTGAAGAAAGAATCAGCGACACCCTTTTGGTTGGATCGGAGAAGAAGACCAAGAAAGTAGAAATTCAGGTGGGTAATGGCGGAAACAATTCAGAGGAGAAACTGAAGAAGAGAGTAAGTAGAACAAGGGTGGTTCCGTCGTCGAGATCGCTGAAAAGGGATCCCAATCTGACGTGCTTGGTCGACGGATGCAAGGCCGACCTGAGCAATTGCAAGGACTATCATCGCAGGCATAGGGTCTGTGAGCGCCACTCCAAGATTCCGGTCGTGCTCGTGAGAGGCGAAGAACAACGATTTTGCCAGCAGTGTAGCAGATTCCATTCTCTGGGTGAGTTTGATGAGGTGAAAAGAAGCTGCAGGGAACGCTTGGACGGGCATAATCGGCGCCGGAGAAAGCCTCAGCCGGAATCCATATACTTGACTCCCAAGGACTTCCTGTCCAATTTCAAAGGTCCCAGAATCTTGCAATTCAGCAGTTCACAGCGCAGTATGCCTGATTTGGATGCAAAGATTGCGTTGGCTCCTTATGCTTGGAAAACAGAAGCTGAAGCCATAGTCGATAACGGTCGAAAACGAATTCCTGTAATCGACTGGAAAACTCCTCCAAATCCTTCGGTTGCCCATGTACGCCATGTCGGAGATAAACAATTCTCATTGAAGCAGACAAACAATCAGAAAGATATCAACCAATCAACCCCTCAATTTTCTTCCTGCAACCCACTGCCCTTGGCCATCTCCTCGCCGGAAAGTGGAAGAGGCAGCCGTGGCGTTTCACAGCCAGTTAACTCCGGTCGTGCTCTCTATCTTCTGTCATCGTCACCATCACAAGCTTCAGGACTTGGTCTAAGCTGCTTCGATCTTCCACAAGAGTACTACTACGCCTACTCGAGGGAATCGACCGCCATTCCACAAGATACGTTGTTCCAAACGAGAGGCTCCGACGGCTCGTTCGAAGCTGAGCTGTCCCCGTCGCTCCTGACTTCTTGGGAGTAG | 1095 | 49.04 | MRRRKKKKKKEKLQLGKSMDWEWRKFAWEETENLTEERISDTLLVGSEKKTKKVEIQVGNGGNNSEEKLKKRVSRTRVVPSSRSLKRDPNLTCLVDGCKADLSNCKDYHRRHRVCERHSKIPVVLVRGEEQRFCQQCSRFHSLGEFDEVKRSCRERLDGHNRRRRKPQPESIYLTPKDFLSNFKGPRILQFSSSQRSMPDLDAKIALAPYAWKTEAEAIVDNGRKRIPVIDWKTPPNPSVAHVRHVGDKQFSLKQTNNQKDINQSTPQFSSCNPLPLAISSPESGRGSRGVSQPVNSGRALYLLSSSPSQASGLGLSCFDLPQEYYYAYSRESTAIPQDTLFQTRGSDGSFEAELSPSLLTSWE | 364 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 14250979 | 14252329 | - | Bpe024262.2 | Bpe09g00547 | 108947 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe09g00547 | 364 | Gene3D | - | 84 | 154 | IPR036893 | GO:0003677|GO:0005634 | |
Bpe09g00547 | 364 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 | 55 | 316 | IPR044817 | GO:0003677 | |
Bpe09g00547 | 364 | Pfam | SBP domain | 93 | 166 | IPR004333 | GO:0003677 | |
Bpe09g00547 | 364 | ProSiteProfiles | Zinc finger SBP-type profile. | 90 | 167 | IPR004333 | GO:0003677 | |
Bpe09g00547 | 364 | SUPERFAMILY | SBT domain | 92 | 172 | IPR036893 | GO:0003677|GO:0005634 | |
Bpe09g00547 | 364 | PANTHER | TRANSCRIPTION FACTOR SBP FAMILY-RELATED | 55 | 316 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe09g00547 | Bpe11g01487 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe07g00895 | Bpe-Chr7:14987920 | Bpe09g00547 | Bpe-Chr9:14250979 | 2.86E-49 | dispersed | |
Bpe09g00547 | Bpe-Chr9:14250979 | Bpe15g00225 | Bpe-Chr15:13365051 | 1.45E-42 | dispersed | |
Bpe11g01487 | Bpe-Chr11:11061847 | Bpe09g00547 | Bpe-Chr9:14250979 | 7.91E-154 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21885 | PF03110 | SBP | 6.60E-31 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe09g00547 | - | - | qsu:112033436 | 257.684 |