Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00547 ATGCGTAGAAGGAAAAAGAAGAAGAAGAAGGAGAAGCTTCAGTTGGGAAAATCTATGGACTGGGAATGGAGAAAATTTGCTTGGGAGGAAACTGAAAATTTGACTGAAGAAAGAATCAGCGACACCCTTTTGGTTGGATCGGAGAAGAAGACCAAGAAAGTAGAAATTCAGGTGGGTAATGGCGGAAACAATTCAGAGGAGAAACTGAAGAAGAGAGTAAGTAGAACAAGGGTGGTTCCGTCGTCGAGATCGCTGAAAAGGGATCCCAATCTGACGTGCTTGGTCGACGGATGCAAGGCCGACCTGAGCAATTGCAAGGACTATCATCGCAGGCATAGGGTCTGTGAGCGCCACTCCAAGATTCCGGTCGTGCTCGTGAGAGGCGAAGAACAACGATTTTGCCAGCAGTGTAGCAGATTCCATTCTCTGGGTGAGTTTGATGAGGTGAAAAGAAGCTGCAGGGAACGCTTGGACGGGCATAATCGGCGCCGGAGAAAGCCTCAGCCGGAATCCATATACTTGACTCCCAAGGACTTCCTGTCCAATTTCAAAGGTCCCAGAATCTTGCAATTCAGCAGTTCACAGCGCAGTATGCCTGATTTGGATGCAAAGATTGCGTTGGCTCCTTATGCTTGGAAAACAGAAGCTGAAGCCATAGTCGATAACGGTCGAAAACGAATTCCTGTAATCGACTGGAAAACTCCTCCAAATCCTTCGGTTGCCCATGTACGCCATGTCGGAGATAAACAATTCTCATTGAAGCAGACAAACAATCAGAAAGATATCAACCAATCAACCCCTCAATTTTCTTCCTGCAACCCACTGCCCTTGGCCATCTCCTCGCCGGAAAGTGGAAGAGGCAGCCGTGGCGTTTCACAGCCAGTTAACTCCGGTCGTGCTCTCTATCTTCTGTCATCGTCACCATCACAAGCTTCAGGACTTGGTCTAAGCTGCTTCGATCTTCCACAAGAGTACTACTACGCCTACTCGAGGGAATCGACCGCCATTCCACAAGATACGTTGTTCCAAACGAGAGGCTCCGACGGCTCGTTCGAAGCTGAGCTGTCCCCGTCGCTCCTGACTTCTTGGGAGTAG 1095 49.04 MRRRKKKKKKEKLQLGKSMDWEWRKFAWEETENLTEERISDTLLVGSEKKTKKVEIQVGNGGNNSEEKLKKRVSRTRVVPSSRSLKRDPNLTCLVDGCKADLSNCKDYHRRHRVCERHSKIPVVLVRGEEQRFCQQCSRFHSLGEFDEVKRSCRERLDGHNRRRRKPQPESIYLTPKDFLSNFKGPRILQFSSSQRSMPDLDAKIALAPYAWKTEAEAIVDNGRKRIPVIDWKTPPNPSVAHVRHVGDKQFSLKQTNNQKDINQSTPQFSSCNPLPLAISSPESGRGSRGVSQPVNSGRALYLLSSSPSQASGLGLSCFDLPQEYYYAYSRESTAIPQDTLFQTRGSDGSFEAELSPSLLTSWE 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14250979 14252329 - Bpe024262.2 Bpe09g00547 108947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00547 364 Gene3D - 84 154 IPR036893 GO:0003677|GO:0005634
Bpe09g00547 364 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 55 316 IPR044817 GO:0003677
Bpe09g00547 364 Pfam SBP domain 93 166 IPR004333 GO:0003677
Bpe09g00547 364 ProSiteProfiles Zinc finger SBP-type profile. 90 167 IPR004333 GO:0003677
Bpe09g00547 364 SUPERFAMILY SBT domain 92 172 IPR036893 GO:0003677|GO:0005634
Bpe09g00547 364 PANTHER TRANSCRIPTION FACTOR SBP FAMILY-RELATED 55 316 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe09g00547 Bpe11g01487 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00895 Bpe-Chr7:14987920 Bpe09g00547 Bpe-Chr9:14250979 2.86E-49 dispersed
Bpe09g00547 Bpe-Chr9:14250979 Bpe15g00225 Bpe-Chr15:13365051 1.45E-42 dispersed
Bpe11g01487 Bpe-Chr11:11061847 Bpe09g00547 Bpe-Chr9:14250979 7.91E-154 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21885 PF03110 SBP 6.60E-31 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00547 - - qsu:112033436 257.684