Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00550 ATGGATCCCAAAGGCTCAAAGCAGCCGCAGGAAGTGGTTCCCAATTTTTTGCAAGCTCGCCCCCAATCTCAGCTAGAATCAAATATGGCTGAAAATAAATCTTCCGAAATTAAGGATTTTCAGAGTGTAGTAGCAGATAAAGAAGAGGGGAAGAAGCAATTAGCTCCAAAACGAAGCTCGAATAAAGATAGGCACACCAAGGTAGATGGTAGAGGTAGAAGGATAAGGATGCCAGCTCTGTGCGCAGCGAGGATTTTTCAACTGACAAGAGAATTAGGGCATAAATCAGATGGGGAAACCATCCAGTGGCTTTTGCAACAGGCGGAGCCGTCGATAATTGCGGCTACCGGGACCGGAACTATCCCGGCTTCTGCTTTAGCGGCGGCCGGAGTATCTGTATCTCAGCAAGGGACCTCTTTATCAACTGGATTGCACCAAAAGATTGAGGATGATTTCGGAGGGTCAGGAAGTAGGACCAGTTGGGCTATGGTGGGTGGCAATTTGGGGAGACCGCCACCCCATATGGCTTCAGGGCTATGGCCTCCAGTCGGTAGCTTTGGGTTTCAGTCATCGTCTTCTCCGACAACAAATATGACACCCGAGAGTGCAAATTACCTCCAGAAGATCGGGTTCCCTGGATTTGACTTGCCAGTCGGGAATATCGGTCCGATGAGTTTCACCTCGATTCTGAGCAGCAATAGCCAGCAGCTGCCGGAGCTGGGGCTAGGGTTGTCGCCGGAAGGTCACATCGGAGTTTTGAATCCACATGCTTTCACTCAGATTTATCAGCAGATGCGGCAAGCTAGAGTTCATCCGCAACATCACCAAGCTTCTCCTAAGGATGATTCTCAAGGTTCAGGCTCAGCCAACTAG 873 49.71 MDPKGSKQPQEVVPNFLQARPQSQLESNMAENKSSEIKDFQSVVADKEEGKKQLAPKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGVSVSQQGTSLSTGLHQKIEDDFGGSGSRTSWAMVGGNLGRPPPHMASGLWPPVGSFGFQSSSSPTTNMTPESANYLQKIGFPGFDLPVGNIGPMSFTSILSSNSQQLPELGLGLSPEGHIGVLNPHAFTQIYQQMRQARVHPQHHQASPKDDSQGSGSAN 290
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 14289329 14290201 + Bpe024266.1 Bpe09g00550 108950
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00550 290 MobiDBLite consensus disorder prediction 266 290 - -
Bpe09g00550 290 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 286 IPR005333 GO:0003700
Bpe09g00550 290 MobiDBLite consensus disorder prediction 1 70 - -
Bpe09g00550 290 MobiDBLite consensus disorder prediction 40 70 - -
Bpe09g00550 290 Pfam TCP family transcription factor 60 147 IPR017887 -
Bpe09g00550 290 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 29 286 - -
Bpe09g00550 290 ProSiteProfiles TCP domain profile. 61 115 IPR017887 -
Bpe09g00550 290 MobiDBLite consensus disorder prediction 11 39 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00690 Bpe-Chr4:4420563 Bpe09g00550 Bpe-Chr9:14289329 1.53E-34 dispersed
Bpe08g00165 Bpe-Chr8:914169 Bpe09g00550 Bpe-Chr9:14289329 7.52E-29 dispersed
Bpe09g00550 Bpe-Chr9:14289329 Bpe12g00551 Bpe-Chr12:11348752 1.17E-39 dispersed
Bpe14g01350 Bpe-Chr14:10779890 Bpe09g00550 Bpe-Chr9:14289329 1.84E-119 transposed
Bpe11g01485 Bpe-Chr11:11046775 Bpe09g00550 Bpe-Chr9:14289329 7.07E-154 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21886 PF03634 TCP 1.80E-31 No_clan Bpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00550 - - jre:108987051 419.083