Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00561 ATGGTTTCAGAAGAAGAGCTTTTCGTACAAAAAATCTGCGAGCTGTACGACCAAATCTCAAGCCTGGAGAGCCTCAAACCAGGCAAAAATGTCGACACACTCTTCAATCAGCTGGTGCTGACTTGCATGCAGCCAGGCCCTCTTGAGGTAGCCAAACTTTGCACGAGGGTTCAGCAAATCAGAGCCAAGCTCATTAAACTATGTGCTGAGGCTGAGGGTCTTTTAGAGAACCATTTCTCGACCATCTTAGCCTCTTTTAAAAACCCACTTCAAAATCTCAGCCTTTTCCCTTATTACTCTAACTACCTCAAACTTAGCCTTCTCGAGTTCAACATTCTCACCCATTTTTGCCAAAACCCACCTGCCAAAATAGCTTTTATTGGGTCAGGTTCACTTCCTCTTACTTCCATTGTTTTAGCCTTAAACCACCTCCCCTCCACCACTTTTCACAACTATGATATCGACCCAGTAGCCAACTCAAAGGCACTTTCATTGATTTCATCTCATCCTGACCTGTCAAAAAGAATGTTTTTTCACACTGCAGATGTAATGAACGTCACTGCTGTTCTTAAAGAGTATCAAGTAGTGTTTTTAGCTGCTTTAGTTGGTATGAATAAGGAAGAGAAAGTTAAAGTCATAGACCATTTGTGCAAGTATATGGCTCCTGGAGCTTATCTGATGGTTAGAAGTGCTCATGGAGCAAGGGCATTTCTTTATCCAGTGGTTGATTTTTGTGATTTTCAAGGGTTTGAGATTCTGTCTGTTTTTCATCCAACTGATGAGGTTATAAATTCAGTCATTATTGCGAGGAAAGATGAGCAAGGGAGAAACTCTATTGGAATGCCTATTAAGTGCTCTGAGATGCAGATCTTCAATATTCCAAAAATGGAGGAATCAGCCATGGAAGAGCAGCTTTCTTAA 921 41.37 MVSEEELFVQKICELYDQISSLESLKPGKNVDTLFNQLVLTCMQPGPLEVAKLCTRVQQIRAKLIKLCAEAEGLLENHFSTILASFKNPLQNLSLFPYYSNYLKLSLLEFNILTHFCQNPPAKIAFIGSGSLPLTSIVLALNHLPSTTFHNYDIDPVANSKALSLISSHPDLSKRMFFHTADVMNVTAVLKEYQVVFLAALVGMNKEEKVKVIDHLCKYMAPGAYLMVRSAHGARAFLYPVVDFCDFQGFEILSVFHPTDEVINSVIIARKDEQGRNSIGMPIKCSEMQIFNIPKMEESAMEEQLS 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14428648 14429568 - Bpe024276.1 Bpe09g00561 108961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00561 306 PANTHER SYNTHASE, PUTATIVE-RELATED 1 303 - -
Bpe09g00561 306 Gene3D Vaccinia Virus protein VP39 5 272 IPR029063 -
Bpe09g00561 306 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Bpe09g00561 306 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 80 232 IPR029063 -
Bpe09g00561 306 PANTHER NICOTIANAMINE SYNTHASE 3 1 303 IPR004298 GO:0030410|GO:0030418
Bpe09g00561 306 Pfam Nicotianamine synthase protein 4 273 IPR004298 GO:0030410|GO:0030418
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01840 Bpe09g00561 CCT
Bpe09g00561 Bpe11g01412 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00561 Bpe-Chr9:14428648 Bpe11g01413 Bpe-Chr11:10515122 0 dispersed
Bpe11g01412 Bpe-Chr11:10510840 Bpe09g00561 Bpe-Chr9:14428648 1.58E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00561 K05953 - tcc:18600574 424.861