Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00573 ATGAACAGTATTGAAGAATCAAGAACGAGATCTCCTATCGTTCCCCTTGCAACCCTAATTGGTCGTGAGCTCAGGAAAGAGAAGATTGAGAAACCTTTCTTGAAGTATGGACAGGCTGCCTTGGCTAAGAAAGGAGAGGATTTGTTTTTGATCAAATCTGAATGCCAAAGGATTCCCGGAAACTCAACGACATCATTTTCGGTCTTTGCGATATTTGATGGCCATAATGGCATATCAGCTGCTATATTTACAAAGGAGCATTTATTGGGTAATGTCTTGAGTGCGATTCCTCCGGGGATTAGTCGGGAGGAGTGGCTTCAAACTCTTCCCCGTGCAATGGTTGCAGGTTTTGTGAAAACCGACATAGAGTTTCAGCAGAAAGGCGAGACATCCGGGACTACTGTCACGTTTGTCATTGTTGATGGGTGGACTATTACTGTCGCATCTGTTGGAGATTCTCGGTGCATATTGGACACCCAAGGAGGCGTGGTTTCTCTTTTGACCGTCGATCACAGACTGGAAGAAAACGAAGAGGAGAGAGAGAGAGTTACTGCTAGTGGGGGTGAGGTGGGAAGGCTCAATGTTTTTGGGCGCAACGAGGTTGGCCCCCTCCGTTGCTGGCCTGGTGGATTATGTCTTTCTAGGTCTATAGGAGACACAGATGTGGGAGAATTTATTGTTCCAATACCCCACGTTAAACAAGTAAAGCTTTCAAAAGCTGGTGGACGCCTAATAATAGCTTCTGATGGAATATGGGACGCATTATCTTCCGATACGGCTGCAAAGTCTTGTCGCGGTTTACCTGCAGACCTCGCTGCGAAGTTAGTTGTCAAGGAGGCTCTGAGATCAAGGGGTCTTAAGGATGATACAACTTGCTTGGTTGTTGATATTATCCCATCAGATCATTCTGTTTTACCATCAACACCTCGGAAGAAGCAAAGTATATTTGATTCATTTATTTTTGGAAAGAAATCTCAGAATTCAATGGCCAAACCTGGAAATAAGCTCTTTGCCGTTGGAGCTGTTGAAGAATTGTTTGAAGAGGGTTCTGCAGTGCTTGCAGAGAGGCTAGGCAAGGATAGAAACTCAGGAATTTTCAAGTGTGCGGTCTGCCAAGTGGATCAATCCCCAAATGAAAGCTTATCCGCAAACTCAGGTTCTTTCTTTTCACCATCGTCGAAGCCTTGGGAAGGTCCTTTTCTATGTGCCAATTGTCGAAAGAAAAAAGATGCGATGGAAGGGAAAAAGCCAAGCACGACGTGA 1263 45.05 MNSIEESRTRSPIVPLATLIGRELRKEKIEKPFLKYGQAALAKKGEDLFLIKSECQRIPGNSTTSFSVFAIFDGHNGISAAIFTKEHLLGNVLSAIPPGISREEWLQTLPRAMVAGFVKTDIEFQQKGETSGTTVTFVIVDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGRNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSKAGGRLIIASDGIWDALSSDTAAKSCRGLPADLAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHSVLPSTPRKKQSIFDSFIFGKKSQNSMAKPGNKLFAVGAVEELFEEGSAVLAERLGKDRNSGIFKCAVCQVDQSPNESLSANSGSFFSPSSKPWEGPFLCANCRKKKDAMEGKKPSTT 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14518416 14520658 + Bpe024288.1 Bpe09g00573 108973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00573 420 SMART PP2C_4 23 295 IPR001932 -
Bpe09g00573 420 CDD PP2Cc 43 297 IPR001932 -
Bpe09g00573 420 SMART PP2C_SIG_2 51 297 IPR001932 -
Bpe09g00573 420 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 4 419 - -
Bpe09g00573 420 ProSiteProfiles PPM-type phosphatase domain profile. 32 297 IPR001932 -
Bpe09g00573 420 SUPERFAMILY PP2C-like 43 297 IPR036457 -
Bpe09g00573 420 Pfam Protein phosphatase 2C 61 279 IPR001932 -
Bpe09g00573 420 Gene3D - 39 302 IPR036457 -
Bpe09g00573 420 PANTHER ALPHABET, ISOFORM E-RELATED 4 419 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01829 Bpe-Chr2:20455154 Bpe09g00573 Bpe-Chr9:14518416 0 dispersed
Bpe03g00007 Bpe-Chr3:57203 Bpe09g00573 Bpe-Chr9:14518416 0 dispersed
Bpe09g00573 Bpe-Chr9:14518416 Bpe02g00524 Bpe-Chr2:3410677 2.78E-25 dispersed
Bpe09g00573 Bpe-Chr9:14518416 Bpe14g00296 Bpe-Chr14:2943164 6.35E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00573 - - tcc:18600536 708.368