Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00577 ATGGGACATTTGTCTTCCATGTTAGATGGACTGGCAAGCTCGTTTTCGATGAGGAAGTGGCGAAACATGGACAATATTGGGAGAAGAGAAGTTGCAGGAGCCATGGAGAAGGATGCAAAGAAAAAGGATTTAATTTTACGCACATCTGGTAGTGTAAACTTTGATGGTTCGAGCAATTTTGCCTCCGTGTTTTCTAAGAAAGGCGAGAAAGGAGTAAATCAAGATTGTTGCATAGTTTGGGAGGAATTTGGACAACGAGAGGACATGATCTTCTGCGGGGTTTTCGATGGTCATGGGCCATGGGGTCATTTTGTTGCGAAAAATGCACAAGAATCAATGCCATCATCCCTTTTGGGTAATTGGCAAGAAGCTCTATCCCAATCGTCCTGCATAGGAGATGTCGACTCTGACTATGAAAAAAACCACCAACGCTTCGAGCTATGGAAAAACTCTTACATAAAAACATGTGCAGCTATTGATCAGCAGCTCGAGCATCATCGGAAAATCGACTCGTTTTACAGTGGAACAACTGCCTTGTCAATTGTCAAACAGGGTGAGCTAATAGTCATGGCTAATGTCGGAGACTCTCGTGCTGTATTAGCCACATCATTGAATGACGGAAGCCTAGTTCCCGTTCAACTTACTGTCGATTTCAAGCCGAATTTGCCTCAGGAGGCAGAGCGGATAGCTCAGTGCAATGGCCGAGTGTTTTGCTTAGACGATGAGCCTGGAGTTTACCGGGTGTGGCTACCGCATAGGCAATCACCTGGACTGGCCATGTCCCGAGCATTGGGTGATTACTGTGTCAAAGGCTTCGGACTCATTTCAGTTCCAGAAGTGACTCAGAGAACTATAACAAATGAAGATCACTTCGTTATCCTGGCAACTGATGGGGTTTGGGATGTTATTTCAAATCAAGAAGCTGTGCTGATTGTTTCGTCAGCACCGGAACGAGCAAAATCGGCCAAGCTTCTGGTGAAGGCAGCGGCTCGAGCATGGAGACGCAAGTGGCCGGGAATTGGCAGGGACGACATATCGGCCATATGTCTCTTCCTTCACCCTTCTCCTTAA 1071 46.41 MGHLSSMLDGLASSFSMRKWRNMDNIGRREVAGAMEKDAKKKDLILRTSGSVNFDGSSNFASVFSKKGEKGVNQDCCIVWEEFGQREDMIFCGVFDGHGPWGHFVAKNAQESMPSSLLGNWQEALSQSSCIGDVDSDYEKNHQRFELWKNSYIKTCAAIDQQLEHHRKIDSFYSGTTALSIVKQGELIVMANVGDSRAVLATSLNDGSLVPVQLTVDFKPNLPQEAERIAQCNGRVFCLDDEPGVYRVWLPHRQSPGLAMSRALGDYCVKGFGLISVPEVTQRTITNEDHFVILATDGVWDVISNQEAVLIVSSAPERAKSAKLLVKAAARAWRRKWPGIGRDDISAICLFLHPSP 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 14567578 14569063 + Bpe024293.1 Bpe09g00577 108977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00577 356 CDD PP2Cc 59 352 IPR001932 -
Bpe09g00577 356 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Bpe09g00577 356 PANTHER ALPHABET, ISOFORM E-RELATED 1 356 - -
Bpe09g00577 356 Pfam Protein phosphatase 2C 84 323 IPR001932 -
Bpe09g00577 356 SMART PP2C_4 53 350 IPR001932 -
Bpe09g00577 356 Gene3D - 53 353 IPR036457 -
Bpe09g00577 356 SUPERFAMILY PP2C-like 57 354 IPR036457 -
Bpe09g00577 356 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 356 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00577 Bpe-Chr9:14567578 Bpe09g00681 Bpe-Chr9:15406769 9.69E-116 dispersed
Bpe11g01396 Bpe-Chr11:10409886 Bpe09g00577 Bpe-Chr9:14567578 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00577 - - mnt:112092338 525.783