Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00634 ATGGAAGTGAATACGCATGACGGTATTGGGGATGATTTTTTCGAGCAGATTTTGGCAGTGCCTCCTGCTTTTAATGGGGGAGAGTCGGCTGAGTATGGCGGGAGAGAGGTGGGCTCTGTGGCTATGGCGTTACAGTTAGGGTCTGGAGTAGGAGGAAGAGGAGATGATTGTGGTGGCTCTGGAGGTGAATTGAGAGGGACCGCCTTGCAAGGGTTGGGTATGCCTCTAGGATTGAACTTTGAACGGAGCTTTTTGAGGCGAGGGAGATTTGGAGAAGAGATGGAAGCTAATAGCCGTAACAATGCGAATACAAATGCTTCTTCTTCTGCTACTTCTGGAATTTCTGAAAGAGATTCCGTGAATATGAATGCTTTATTCCCAGCTTTTGGACATTTACAATCTCAGCCTGTTAGGCCAGTGCCACCTCCCTCCCAACTACACCAGCCCTATAATGGTCAACCAACATCTGGGCAAGTTCCTGCTGTATCCCAACTACCTACGATGCGTCCTCGGGTTCGAGCAAGAAGAGGACAAGCAACAGATCCTCACAGCATTGCAGAGAGGTTACGAAGGGAACGCATTGCAGAAAGGATGAAGGCTTTGCAGGAGCTGGTTCCTAGCTGTAACAAGTCGGATAGGGCAGCCATGCTTGATGAAATTGTGGATTATGTCAAGTTTCTAAGGCTTCAGGTCAAGGTTCTGAGCATGAGCAGACTAGGTGGAGCGGGTGTAGGTCAGCTCCATCCGGATGGACCCGGATTGGGTGTAGCTGAGGGAATTGAATGTGGAACTGATCAACAAGTTTGGGAAAAATGGTCAACGGATGGAACAGAGCAACAAGTAGCCAAATTGATGGAAGAAGACGTTGGAGCTGCCATGCAATTTCTTCAATCAAAGGCTCTTTGCATCATGCCCATATCATTAGCTTCTGCAATTTTCAGAACCTACCAATTGGACGCGCAGATGACAGTTAAGCCAGAATCCGATACTCCATAG 996 48.09 MEVNTHDGIGDDFFEQILAVPPAFNGGESAEYGGREVGSVAMALQLGSGVGGRGDDCGGSGGELRGTALQGLGMPLGLNFERSFLRRGRFGEEMEANSRNNANTNASSSATSGISERDSVNMNALFPAFGHLQSQPVRPVPPPSQLHQPYNGQPTSGQVPAVSQLPTMRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKSDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGVGQLHPDGPGLGVAEGIECGTDQQVWEKWSTDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRTYQLDAQMTVKPESDTP 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15007611 15011445 + Bpe024349.1 Bpe09g00634 109034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00634 331 SMART finulus 184 233 IPR011598 GO:0046983
Bpe09g00634 331 MobiDBLite consensus disorder prediction 95 115 - -
Bpe09g00634 331 PANTHER DEHYDROGENASE, PUTATIVE, EXPRESSED-RELATED 7 320 - -
Bpe09g00634 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 237 IPR036638 GO:0046983
Bpe09g00634 331 MobiDBLite consensus disorder prediction 96 115 - -
Bpe09g00634 331 MobiDBLite consensus disorder prediction 133 161 - -
Bpe09g00634 331 Gene3D - 173 235 IPR036638 GO:0046983
Bpe09g00634 331 Pfam Helix-loop-helix DNA-binding domain 183 227 IPR011598 GO:0046983
Bpe09g00634 331 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 320 - -
Bpe09g00634 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 227 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe09g00634 Bpe11g01332 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00634 Bpe-Chr9:15007611 Bpe10g00393 Bpe-Chr10:11477617 5.28E-77 dispersed
Bpe11g01332 Bpe-Chr11:9959231 Bpe09g00634 Bpe-Chr9:15007611 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21892 PF00010 HLH 2.00E-07 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00634 - - zju:107412218 385.185