Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00648 ATGTCTTCTCCGGCCACTGCGACAACCACTGACACAGGGGCCCACATGCTCTACCCTCATTCTGCGCCGTCTGCGGCGGTGTCTCCGTCCCCGTTGGAGTCTGTCCGGCGGAAGAGAGGGAGACCCAGAAAGTATGGCACCCCAGAAGAGGCTTTAGCCGCGAAGAAAGCTGCGACCGCCTCCGCCCATTCTTCCACTTCGAGGGAGAAGAAGCACCGGGGTTCTTCTTTTGCTCCTTCTGCCTCTTCGTTTTCTGAATCTTCGAAGAAATCCCAACTAGGTGCTCTCGGAAACGCTGGACAAGGTTTCACACCACACGTACTAAATGTTGCAGCTGGTGAGGACGTGGGGCAAAAAATTATGTTGTTCATGCAACAGAGTAAGCGGGAAATGTGTGTTCTTTCTGCATCAGGGTCAATCTCTAATGCAGCTCTCCGACAGCCAGCCACATCAGGAGGCAATATCGCATATGAGGGTCGTTTTGAGATTATCTCACTAAGTGGATCATATGTGAGAACTGATCTCGGAGGGAGGACCGGCGGCCTCAGTGTATGTCTGTCCAGTGCCGATGGCCAAATCGTTGGGGGAGGAGTTGGTGGGCCTTTGAAAGCCTTAGGACCTGTTCAGGTCATTGTGGGTACATTTCAAATGGACTCGAAGAAAGAAGCAATCAGCGGAGCAAAAGGCGATGGACCTGTAAGCAAGTTGCCATCAATCGGTGGCCTATCAGGATCAAGTTTAGGCTATCGTTCAACAATCGAGCCATCTGGGAGAAATCCCATGAGGGGAAACGACGATCATCAAGTAATGGGCGGTAGCCATTTTATCCTTCAACCCCACGCCGTACACTTATCTTCACGAACCGCCGATTGGAGGAGCAGTTCAGATCCTACCGCCACCGCGGGTTATGAATTGGCAGTAAGAGTCGGTCGTGGGGCAAACCAATCTCGAGAAAACGGAGACTACGATCAGATTCCGGACTAG 984 52.24 MSSPATATTTDTGAHMLYPHSAPSAAVSPSPLESVRRKRGRPRKYGTPEEALAAKKAATASAHSSTSREKKHRGSSFAPSASSFSESSKKSQLGALGNAGQGFTPHVLNVAAGEDVGQKIMLFMQQSKREMCVLSASGSISNAALRQPATSGGNIAYEGRFEIISLSGSYVRTDLGGRTGGLSVCLSSADGQIVGGGVGGPLKALGPVQVIVGTFQMDSKKEAISGAKGDGPVSKLPSIGGLSGSSLGYRSTIEPSGRNPMRGNDDHQVMGGSHFILQPHAVHLSSRTADWRSSSDPTATAGYELAVRVGRGANQSRENGDYDQIPD 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15110086 15114608 - Bpe024364.1 Bpe09g00648 109048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00648 327 CDD DUF296 104 215 IPR005175 -
Bpe09g00648 327 Gene3D - 105 228 - -
Bpe09g00648 327 MobiDBLite consensus disorder prediction 1 15 - -
Bpe09g00648 327 ProSiteProfiles PPC domain profile profile. 99 236 IPR005175 -
Bpe09g00648 327 MobiDBLite consensus disorder prediction 1 85 - -
Bpe09g00648 327 SUPERFAMILY AF0104/ALDC/Ptd012-like 101 215 - -
Bpe09g00648 327 MobiDBLite consensus disorder prediction 307 327 - -
Bpe09g00648 327 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 5 319 IPR039605 GO:0003680
Bpe09g00648 327 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 5 319 - -
Bpe09g00648 327 Pfam Plants and Prokaryotes Conserved (PCC) domain 105 216 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00648 Bpe-Chr9:15110086 Bpe12g00400 Bpe-Chr12:9426340 2.40E-47 dispersed
Bpe09g00648 Bpe-Chr9:15110086 Bpe13g00952 Bpe-Chr13:15419854 1.00E-49 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00648 - - csv:101221844 381.719