Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00664 ATGGCTCTCGCAATCTCCAACGCCGTCCGCTGCCCTAAATTTAGAATTTCGCAGAATAATAACTCTCCCAAATTCTCTGTTTTGCATTTCCCTCTATCTTCAATCAGAAGGAAAAAGGAAATTCTAGTGGTTTGTGCAGCTGCATCTGCTGCGGGAAGTTCGAGTCCAGATAGCGACTTAAACCCCTACGAGGTCCTTGGTGTAAGCCCAATTGAGGGATTCGACGTCATCAAGGTAGCATACAAGAAGAAACTCAAAGAAGCAGAGAGGAAGGGTGACGAAGTAACAGCTAGCAGACTGGAGAAAGCATATGACAAAGTCATGATGGCACAATTGACAAATCGCAAGAAAGGTGTCACATTTGGCTCATTCAAGGTTTCAAAAGACATCAAATATGCTGACAACCAGCCAATTGTACCATGGGGGCCAAGGTTTGCTAAATCAAGTGCAAGAGATATGCAAATTAACATGGCAATATCTGCAGTATTTACTGCTTGGGTTTTGATAAAGCGCAATGCTGAATATAAACCTCTACAATTTTTAGCTTTTGCTTTTGTTTATCGGCTTTTTGAGAAGTTGAAAGCCTCTGAACCACCTCCAACATATACAGAAGAAGGCGAAGATTCAGGGAGAGGTATACGAATGGGAAAACGGCTGCTTCGATCTCTCGCCCTAGTATTTGGATGTATAACTGTTTCATCTCTGGCATACACTGCTATTTTGAATCTTATCGAGTTTTTAGGTAGCTACATTCCGTCTATCCTATATAATAACCAGACTGAGTGGACGAGAGAGGAAGATGAGAAGCTACTTCATCTTGCGAAGCTCACGCCAACACAATGGAGAAGAGTTGATGTGGAAGCACAATTAAGAAAGCAAGATGTTGCAAAGGATAAAATTGCACAAAGACTGGATGCTCCGACGGCTATATTGCAAGCGAAAAAATTAAATGATCCTGAAACTGTGAGGAAAAGATCAAAACTAATGCTTCCTGCACCTCAAATTTCTGATCATGAATTAGAGGAAATTGCAAAGATGGGTTATGCCAGTGATCTTCTTACTGGAAGTGAGGAACTCACAGAAGGTAGTGGAGCAACACGCACTCTTCTTGCAAATTATGCGAAAACGCCACAACAAGGAATGACACCTTTTCGAACTCCACAAAGAACTGCCATTCCTGTGATTGAAGAATTTGAAGAAGATGAGCTAAATGAGGCTGTTTTTTTAATAAACGAAGAAGTTCAGTACCTTCGAGTAGCAATGGAACATGAGAATGAATCCCTTGAAGAATTTGTTGAAGCACATAAAACTTGCCAAAATGATCTCACGTATTTCTCCACCCGAAATGCTTATGGTCTTTCAAGTGTCGCTGGCAATATGGAGAAGCTTGCAGCATTGCAAAATGAATTTGAGAAAATGGATGACGATACTGAAAAGGCTGTACGTATGGAGAAGAAGGTCAAAGTTCTTATACATGGTTATGAGACAAGGGCCAAAACAAGCCTATGGCCTCAAATTGAAGCTACCTTCAAGCAGATGGAAACTGCTGCAACAGAGCTCGAGTGTTTTCAAGCTTTGCACAAGGAAGAGTTATTAGCTGCATCACACAGGATTAATACGCTCCGGGAAGAAGTTCAAAAGCAAAAGGAACTTGAGCAAACCTTGCAGAGGAGATATGGAAATCGGGTAATGGAGTTAGAAAGAACTCAACGCCTCATGGATCACTACAGAACTCAAGCAAAACAGCATGAAGAAATTGCAGCTGAAAATGATGACCTTACTGAAGCTACTGCTTCTGAGACAGTGGGTTTATTAGTTGATGAAAATGCCTTTGGACTAACTGGTACTATTGATGTTGCCTCAGAGAAAGAACCATCGACAGTGGATATGGATGTTGAATTGCCCGACAATATTTCTTCTGCCTGTGAAGTGGAACCCACGAGAATGGAACAAGATGACCATAATGAAAATGGGATTTGA 1980 41.36 MALAISNAVRCPKFRISQNNNSPKFSVLHFPLSSIRRKKEILVVCAAASAAGSSSPDSDLNPYEVLGVSPIEGFDVIKVAYKKKLKEAERKGDEVTASRLEKAYDKVMMAQLTNRKKGVTFGSFKVSKDIKYADNQPIVPWGPRFAKSSARDMQINMAISAVFTAWVLIKRNAEYKPLQFLAFAFVYRLFEKLKASEPPPTYTEEGEDSGRGIRMGKRLLRSLALVFGCITVSSLAYTAILNLIEFLGSYIPSILYNNQTEWTREEDEKLLHLAKLTPTQWRRVDVEAQLRKQDVAKDKIAQRLDAPTAILQAKKLNDPETVRKRSKLMLPAPQISDHELEEIAKMGYASDLLTGSEELTEGSGATRTLLANYAKTPQQGMTPFRTPQRTAIPVIEEFEEDELNEAVFLINEEVQYLRVAMEHENESLEEFVEAHKTCQNDLTYFSTRNAYGLSSVAGNMEKLAALQNEFEKMDDDTEKAVRMEKKVKVLIHGYETRAKTSLWPQIEATFKQMETAATELECFQALHKEELLAASHRINTLREEVQKQKELEQTLQRRYGNRVMELERTQRLMDHYRTQAKQHEEIAAENDDLTEATASETVGLLVDENAFGLTGTIDVASEKEPSTVDMDVELPDNISSACEVEPTRMEQDDHNENGI 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15273420 15281673 - Bpe024379.2 Bpe09g00664 109064

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00664 659 PANTHER CHLOROPLAST J-LIKE DOMAIN 1 16 260 - -
Bpe09g00664 659 Coils Coil 531 558 - -
Bpe09g00664 659 Coils Coil 566 586 - -
Bpe09g00664 659 Pfam Protein CHAPERONE-LIKE PROTEIN OF POR1-like 74 187 IPR021788 -
Bpe09g00664 659 PANTHER - 16 260 IPR021788 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00664 - - - csv:101213790 391.349
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01310 Bpe-Chr11:9811747 Bpe09g00664 Bpe-Chr9:15273420 1.65E-07 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi14g604 . . Bda07g01179 . . Bpe09g00664 . . . . . . . Car12g00806 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cma11g00972 . . Cpe04g00013 Cpe05g00838 . . . . . . . . . . . . . . . Csa01g03419 . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe11g01310 . 1 832 MYB-Related Transcription Factor Family AT1G09770 74.2 0.0e+00 1146.3
Bpe09g00664 . 282 390 MYB-Related Transcription Factor Family AT1G09770 83.5 2.1e-43 174.5
Bpe12g00703 BCT,CCT 188 668 MYB-Related Transcription Factor Family AT3G18100 55.4 3.9e-149 525.4
Bpe12g00703 BCT,CCT 188 668 MYB-Related Transcription Factor Family AT3G18100 55.4 3.9e-149 525.4
Bpe11g01310 . 1 832 MYB-Related Transcription Factor Family AT1G09770 74.2 0.0e+00 1146.3
Bpe09g00664 . 282 390 MYB-Related Transcription Factor Family AT1G09770 83.5 2.1e-43 174.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013239 1 1 1 2 1 0 1 0 0 1 1 0 1 1 1 1 0 2 1 0 1 1 1 1 1 1 1 1 0 1 25
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe09g00664 Bpe_Chr09 FPKM 40.301834 40.620014 0.0 0.0 0.526477 0.764128 1.031179 0.072816 0.082279 0.0