Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00714 ATGTCACTCTTTCTTCGTCTTCACTTCCTCTTCACGCTTACTGCAACCATCGCATCAATGGCGGAATCCCATTACTCCACGTCTCCTCAGCAGGAATCTTCTCCCTCATTCTCACTCTCCGACTGGAGATCCGCCCGTGCCACTTACTACGCCGCCTCCGACCCTCGTGACGCTGTCGGCGGTGCCTGCGGCTACGGCGACCTGGTGAAGGCCGGGTACGGTATGGCCACGGTGGGGCTGAGTGAGACGCTGTTTGAGCGCGGTCAGATCTGCGGCGCTTGCTTCCAGCTGAGGTGTGTTGAGGATCTCCGGTGGTGTATTCCCGGAACTTCGATCATCGTCACAGCGACGAACTTTTGTGCCCCTAATTACGGGTTCACGGCGGAGGGAGGTGGCCATTGTAACCCTCCTAATAATCATTTTGTGCTTCCCATTGAGGCGTTCGAGAAGATTGCTATCTGGAAAGCGGGGAATATGCCTGTTCAATATCGCAGAATCAAGTGCAGAAAGGAAGGTGGGATTCGATTTTCAATCGATGGGGCAGGCATTTTCATTTCTGTGCTGATAAGCAACGTTGGTGGGGCTGGGGATGTACTGGCGGTGAAGATCAAAGGGTCAAGAACCGGTTGGCTTCCGATGGGACGAAATTGGGGACAAAACTGGCATATTAATGCTGATCTGAAGAATCAACCTCTGTCCTTTGAGGTAACAAACAGAGATGGAATTACTCTAACATCTTACAACGTTGCTCCCAAGGATTGGAACTTTGGACAAACCTTTGAAGGCAAACAATTCGACTCTTGA 804 51.62 MSLFLRLHFLFTLTATIASMAESHYSTSPQQESSPSFSLSDWRSARATYYAASDPRDAVGGACGYGDLVKAGYGMATVGLSETLFERGQICGACFQLRCVEDLRWCIPGTSIIVTATNFCAPNYGFTAEGGGHCNPPNNHFVLPIEAFEKIAIWKAGNMPVQYRRIKCRKEGGIRFSIDGAGIFISVLISNVGGAGDVLAVKIKGSRTGWLPMGRNWGQNWHINADLKNQPLSFEVTNRDGITLTSYNVAPKDWNFGQTFEGKQFDS 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15732808 15734660 - Bpe024422.1 Bpe09g00714 109114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00714 267 Pfam Lytic transglycolase 78 163 IPR009009 -
Bpe09g00714 267 SUPERFAMILY Barwin-like endoglucanases 41 191 IPR036908 -
Bpe09g00714 267 Pfam Expansin C-terminal domain 174 251 IPR007117 -
Bpe09g00714 267 Gene3D - 25 169 IPR036908 -
Bpe09g00714 267 PRINTS Expansin signature 219 240 IPR002963 GO:0009664
Bpe09g00714 267 PRINTS Expansin signature 131 148 IPR002963 GO:0009664
Bpe09g00714 267 PRINTS Expansin signature 72 86 IPR002963 GO:0009664
Bpe09g00714 267 PRINTS Expansin signature 112 122 IPR002963 GO:0009664
Bpe09g00714 267 PRINTS Expansin signature 248 264 IPR002963 GO:0009664
Bpe09g00714 267 PRINTS Expansin signature 172 184 IPR002963 GO:0009664
Bpe09g00714 267 PRINTS Expansin signature 99 110 IPR002963 GO:0009664
Bpe09g00714 267 PRINTS Expansin signature 148 161 IPR002963 GO:0009664
Bpe09g00714 267 PRINTS Expansin signature 184 205 IPR002963 GO:0009664
Bpe09g00714 267 SUPERFAMILY PHL pollen allergen 170 262 IPR036749 -
Bpe09g00714 267 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 60 173 IPR007112 -
Bpe09g00714 267 PANTHER EXPANSIN-A13 24 266 - -
Bpe09g00714 267 PRINTS Expansin/Lol pI family signature 41 56 IPR007118 GO:0005576
Bpe09g00714 267 PRINTS Expansin/Lol pI family signature 59 77 IPR007118 GO:0005576
Bpe09g00714 267 PRINTS Expansin/Lol pI family signature 210 224 IPR007118 GO:0005576
Bpe09g00714 267 PRINTS Expansin/Lol pI family signature 156 172 IPR007118 GO:0005576
Bpe09g00714 267 PRINTS Expansin/Lol pI family signature 81 99 IPR007118 GO:0005576
Bpe09g00714 267 PRINTS Expansin/Lol pI family signature 248 262 IPR007118 GO:0005576
Bpe09g00714 267 SMART dpbb_1 77 163 IPR007112 -
Bpe09g00714 267 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 183 262 IPR007117 -
Bpe09g00714 267 Gene3D - 174 265 IPR036749 -
Bpe09g00714 267 PANTHER EXPANSIN-A15 24 266 IPR002963 GO:0009664
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00683 Bpe-Chr7:13496850 Bpe09g00714 Bpe-Chr9:15732808 5.81E-93 dispersed
Bpe09g00714 Bpe-Chr9:15732808 Bpe04g01834 Bpe-Chr4:23631699 1.27E-90 dispersed
Bpe09g00714 Bpe-Chr9:15732808 Bpe13g01406 Bpe-Chr13:19294928 1.41E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00714 - - csv:101206236 479.944