Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe09g00716 ATGGTGCTCTCTAAGACGGCGTCGGAAAGCGATGTGTCGATCCATTCGACCTTTGCGTCTCGCTATGTCCGAGCCTCCCTTCCGAGGTTCAAGATGCCGGAAATGTCGATCCCAAAAGAGGCGGCTTACCAGATTATCAACGACGAGTTGATGTTGGACGGAAACCCGCGGCTGAACTTGGCGTCGTTCGTCACCACTTGGATGGAGCCGGAATGCGATAAGCTCATCATGGACTCCATTAACAAGAACTACGTCGACATGGATGAGTATCCTGTCACTACCGAGCTTCAGAACCGGTGTGTGAACATGATAGCTCATCTGTTCAATGCCCCACTCGGTGAATCGGAGGCAGCTGTCGGAGTTGGAACGGTGGGGTCGTCGGAGGCCATTATGTTGGCCGGCTTAGCATTCAAGAGGAAGTGGCAAAATAAGCGAAAGGCCGAGGGCAAACCCTACGACAAACCAAATATTGTCACCGGAGCTAACGTTCAGGTATGCTGGGAGAAATTTGCAAGATACTTTGAAGTGGAGCTGAAGGAGGTGAAACTGAGAGAAGGATACTACGTTATGGATCCAGAAAAAGCTGTAGAAATGGTGGATGAAAACACTATCTGTGTTGCTGCTATTTTGGGCTCTACCCTCAACGGGGAATTTGAGGATGTCAAGCTATTGAATGATCTATTGGTGAAGAAGAACAGCCAAACTGGATGGGACACACCAATTCACGTTGACGCCGCAAGCGGAGGGTTCATAGCGCCATTTCTGTACCCAGAGCTGGAGTGGGACTTTCGTTTGGAACAGGTGAAGAGCATCAACGTCAGCGGCCACAAATATGGGCTGGTCTACGCCGGGATCGGGTGGGTGATTTGGAGAAGCAAGCAGGATTTGCCGGAAGAACTCATCTTCCATATCAACTATCTCGGCGCCGATCAACCCACCTTCACCCTCAATTTCTCCAAAGGTTCTAGCCAAGTCATTGCTCAGTACTATCAACTCATTCGCCTTGGCCATGAGGGATATACAAACGTAATGGACAATTGTCGCGACAACATGATTGTGCTCAAAGAAGGGTTAGAAAAAACTGGGCGATTCAACATAATCTCGAAGGACGAAGGAGTCCCCCTCGTTGCCTTCTCCTTGAAAGACAACCTCCGACACAATGAGTTTGAAGTTTCCGAGATGTTGAGGCGCTTCGGATGGATAGTTCCAGCATACACAATGCCTCCAGATGCAGAACACATCACTGTCCTTCGAGTCGTCATTCGAGAAGACTTCTCACGTACACTGGCAGAGCGGCTCGTGTCTGACATCGAGAAAGTGTTGCACGAGCTCGACACTCTACCGGCTAGGGTTACCGCCAAGTTAGCGATTGCCCAGGAAACGACCACTCAATGCAATGGCACTGTAGTGGCAAAGAAAAGTTCTCTTGATGTGCAGAGGGAGATCACTGCAACTTGGAAGAAGTTTGTTCTTGAGAGTAAGAAGACCAATGGCATTTGCTAG 1503 49.5 MVLSKTASESDVSIHSTFASRYVRASLPRFKMPEMSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGESEAAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLREGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLVKKNSQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLEQVKSINVSGHKYGLVYAGIGWVIWRSKQDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYTNVMDNCRDNMIVLKEGLEKTGRFNIISKDEGVPLVAFSLKDNLRHNEFEVSEMLRRFGWIVPAYTMPPDAEHITVLRVVIREDFSRTLAERLVSDIEKVLHELDTLPARVTAKLAIAQETTTQCNGTVVAKKSSLDVQREITATWKKFVLESKKTNGIC 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 15744910 15748619 + Bpe024424.2 Bpe09g00716 109116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe09g00716 500 SUPERFAMILY PLP-dependent transferases 16 444 IPR015424 -
Bpe09g00716 500 PANTHER GLUTAMATE DECARBOXYLASE 1 500 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bpe09g00716 500 Gene3D - 66 360 IPR015421 GO:0003824
Bpe09g00716 500 PANTHER GLUTAMATE DECARBOXYLASE 1 500 - -
Bpe09g00716 500 CDD DOPA_deC_like 59 439 - -
Bpe09g00716 500 Gene3D - 1 65 - -
Bpe09g00716 500 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bpe09g00716 500 Gene3D - 361 448 - -
Bpe09g00716 500 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g01075 Bpe-Chr7:16136351 Bpe09g00716 Bpe-Chr9:15744910 0 dispersed
Bpe09g00716 Bpe-Chr9:15744910 Bpe14g00065 Bpe-Chr14:1026114 0 dispersed
Bpe09g00716 Bpe-Chr9:15744910 Bpe02g01352 Bpe-Chr2:17143152 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe09g00716 K01580 - csv:101216119 905.59