Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00006 ATGGATACGTTGTTTAGATTTGCTAGTCGGCAATCTTACAATTCTAGCAGAACTTCGAGCAGTTCAAGATCTTCCCGACAGAATAATTTTTACCAACAGGAAGAAGAAGAATGCTTCAATCTTTTCATGGATGAAGAAGACTTCTCGTCGTCTTCTTCAAAACACTGTAACTACCCGAATCAGCTCCACCAATTCACTACCTCTACCAACACAAGCACTCCAACTCCCACTGAATTCTCCTTTTCTCCCTCAAATGACCTTAATTTCGAGTTTTCCGGCAAGTGGGCAACCGATATACTTCTAGAAATTGGCCGGGCCTTTGCGGATAAGAACAGCACGCGCGTGCAGCAACTTATGTGGATGCTCAACGAGCTCAGCTCTCCCTACGGTGATACCAATCAGAAGCTGGCGGCGTATTTTCTTCAAGCTTTGTTTAGCAGGATAACAGATTCCGGCGACCGCTGCTACTGTACTTTAGCCGCTGCGTCAGAGAAAACGTGCTCTTTCGAATCGACGAGGAAGATGGTGTTGAAATTTCAGGAAGTTAGCCCATGGACTACGTTCAGCCATGTGTCATGTAATGGTGCAATCATGGAGGCTTTTGAGGGACAGGCGAAGCTACACATATTAGATATAAGCAATACGTATGGTACCCAATGGCCCACTTTGCTCGAAGCACTCGCAACTCGTACTGACGAGACTCCGCACCTCAGTCTGACGATGGTGATCGCAACGAGACCTGGCGTCGGTGGAGGAGGAATGCTCGCAAATCAGAAGATAATGAAAGAAATAGGTTTAAGAATGGAGAAATTCGCTAGACTCATGGGGGTGCCTTTCAAATTCAACGCAGTATACCATTCCAGCGACCTTTCCGACCTAGACCTATCGCAATTAGACATCAATGACGACGAAACGATCGCTGTCAACTGCGTCGGTGGATTACACACAGTCCCGGCTGTCAATAATCGGCGGGACACCTTGATTTCGTTGTTCCGGAGTCTAAAACCGAGGATAATAACGGTTGCAGAAGAAGAAGCTGATTTAGACGTTGGCGTTAAAGGGATTGACTTTTTAAGAGGGTTTCAAGAATGTGTTCGGTGGTTTAGGGTTTACTTCGAGTCTTTGGAAGAGAGCTTTGATAGAACGAGCAACGAGCGGTTGATGCTGGAGCGATCGGCAGGAAAGGCCATCGTAGACCTGATAGCTTGCTCTCCGGCGGACTCAACGGAGAGGCGGGAGTCTGCGGCCCGGTGGGCACGACGACTGCATGGAAGTGGGTGCAGCCCGGTGGCGTTTAGTGATGAAGTTTCAGACGATGTTCGAGCGCTGTTAAGACGGTACAAAGAAGGGTGGACGATGAAGCAGGATCCAGAGGGAGCCGGGATGTTCTTGGCGTGGAAAGATCAGCCGGTGGTCTGGGCCAGTGCATGGAGGCCATGA 1440 48.89 MDTLFRFASRQSYNSSRTSSSSRSSRQNNFYQQEEEECFNLFMDEEDFSSSSSKHCNYPNQLHQFTTSTNTSTPTPTEFSFSPSNDLNFEFSGKWATDILLEIGRAFADKNSTRVQQLMWMLNELSSPYGDTNQKLAAYFLQALFSRITDSGDRCYCTLAAASEKTCSFESTRKMVLKFQEVSPWTTFSHVSCNGAIMEAFEGQAKLHILDISNTYGTQWPTLLEALATRTDETPHLSLTMVIATRPGVGGGGMLANQKIMKEIGLRMEKFARLMGVPFKFNAVYHSSDLSDLDLSQLDINDDETIAVNCVGGLHTVPAVNNRRDTLISLFRSLKPRIITVAEEEADLDVGVKGIDFLRGFQECVRWFRVYFESLEESFDRTSNERLMLERSAGKAIVDLIACSPADSTERRESAARWARRLHGSGCSPVAFSDEVSDDVRALLRRYKEGWTMKQDPEGAGMFLAWKDQPVVWASAWRP 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 154097 155536 - Bpe002307.1 Bpe10g00006 109128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00006 479 MobiDBLite consensus disorder prediction 8 29 - -
Bpe10g00006 479 PANTHER PROTEIN SHORT-ROOT 1 478 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Bpe10g00006 479 ProSiteProfiles GRAS family profile. 87 478 IPR005202 -
Bpe10g00006 479 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 478 IPR005202 -
Bpe10g00006 479 Pfam GRAS domain family 98 478 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00015 Bpe-Chr6:168811 Bpe10g00006 Bpe-Chr10:154097 0 dispersed
Bpe10g00006 Bpe-Chr10:154097 Bpe12g00232 Bpe-Chr12:1953665 1.50E-55 dispersed
Bpe10g00006 Bpe-Chr10:154097 Bpe14g00729 Bpe-Chr14:5656426 4.87E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21901 PF03514 GRAS 4.20E-102 CL0063 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00006 - - tcc:18611292 672.544