Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00028 ATGAAGCTGTTGCTGCTGCTGCTGCTGCTCCTCCTCCTCCTCCATCTCCACTTTCCCCCGTCTCTCTCCGCTCGGATTTCCGAATACCGCGCTCTTCTCTCTCTTAAAACCTCCATTATCGGCGACCCCAATTCCTCCCTCTCCTCCTGGAAACGCTCCACCGATCACTGCGCCTGGGCTGGCGTTTCTTGCGATTCCCGCCGCCGCGTCGTTGCTCTCGACCTCTCCGGACTTAATCTCTCCGGCCTTCTTTCGCCCGATATTGCCCACCTCCCACTTCTCGCAAATCTTTCACTCGCCCTTAATCAGTTCTCCGGCCAACTTCCGCCGCAAATCTCTGCCCTCTCTGAGCTCCGGTACCTGAACCTCTCCAACAATTATTTCAATGGTACATTCCCTTCTGAGCTATCGGAGCTTAAGAACCTGCAGGTTTTGGATTTTTATAACAACAACATGACCGGAGATTTGCCTCTCGCCGTCACGGAACTGCCGAATCTCCAGCACTTGCATCTGGGAGGGAACTTTTTCCTCGGCCCGATTCCTGCCGAGTACGGTCGTTGGGAGTTTTTGGAGTATTTGGCGGTTTCTGGTAACGAGCTTGAAGGTCCTATTCCTCCGGAGATCGGGAACTTAGGTAAGCTTCGAGAACTCTACATTGGGTATTACAACAGCTTTGGAGGTAGTTTGCCGGCGGAGATCGGAAACTTATCGTCGTTGGTTAGGTTCGATGCTGCCAACTGCGGGTTAACCGGTGAGATACCTCCGGAACTCGGAAAGCTTCAAAATCTCGATACTCTATTTCTTCAAGTGAATGCGCTGTCTGGGACTTTTCCCTCAGAACTTGGAATGTTAATGAAGTTGAAATCAATGGATTTGTCTAACAACATGCTAACCGGGGAGATTCCGGTTTCTTTCTCCGATCTGAAGAGCTTGACGCTGTTGAATCTGTTTAGAAACAGGCTGCACGGAGCGATTCCAGACTTCATCGGGGACTTGCCAGAGTTAGAAGTGTTGCAGTTGTGGGAGAATAATCTCACCGGTTGGATTCCTCAAGGTCTCGGAAAGAATGGCAAGCTTCAGCTTCTTGATCTTTCTTCGAACAAGCTTACCGGAACTCTTCCACCGGACATGTGCTCCAGCAATCGTCTCCATACTCTGATTACTTTGGGAAATTTCTTGTTCGGACCGATTCCGGAATCTCTCGGGAAATGTGAGTCGCTCAGTCGAATTCGAATGGGGGGAAATTTTCTGAATGGATCGATCCCGATCGGTCTCTTTAATTTGCCGAACCTTACTCAGGTCGAATTGCAGAACAACTTTCTCATCGGCGAGTTTCCGGTGACCGATTCGATATCAGTGAATCTGGGTCAGATTAGTCTGTCGAGCAATCAGCTTTCTGGGTCATTACCACCCTCTATCGGAAACTTCTCCGGCGTTCAAAAACTTCTTCTCTATGGAAATAATTTCTCCGGCCCAATACCATCTGAGATCGGAAAGTTACAACAGTTATCGAAGATAGATTTCAGCCACAACCAGTTCTCCGGTTCGATTGCACCAGAGATAAGTCAATGCAAGCTCCTCACGTTCGTTGATCTCAGTAGAAACGAGCTCTCCGGCCAGATTCCGGACGAGATTACCTCCATGAGGATACTGAATTATCTGAACCTCTCTAGAAACCATTTAGTTGGAAACATTCCTTCTTCCATTGCCTCAATGCAGAGTTTAACTTCTGTAGATTTCTCATACAATAATCTCTCCGGTTTGGTTCCCGGCTCCGGCCAATTTAGCTACTTCAATTCTACGTCATTTATGGGGAACCCCAACCTCTGCGGTCCATATTTAGGACCTTGCAAAAATGGAATCGCCAATTCCGATGGTCGACCTCATGAAAAACCCCACCTCTCAGCTTCTCTGAAGCTTCTGCTAGTCATCGGATTGCTTGTTTGCTCCATTGCGTTCGCCATTGCAGCAATTATGAAAGCTCGGTCACTTAAACGAGGGACTGAGGCTAGAGCATGGAAACTAACAGCTTTTCAACGCTTGGATTTTACAGTTGACGATGTTTTGGATTGCTTGAAAGAAGATAACATCATCGGAAAAGGTGGTGCCGGAACTGTTTACAAAGGGTCCATGCCAAACAGTGAAATCGTCGCCGTTAAACGACTTCCGGCAATGAGCAGAGGTTCTTCCCATGATCATGGATTCAATGCAGAGATTCAAACTCTGGGAAGGATTCGACACCGTCACATCGTTAGATTACTTGGGTTTTGTTCAAATCACGAGACGAATCTTCTGGTATATGAATACATGCCCAATGGAAGCTTAGGCGAAGTTCTTCATGGCAACAAAGGAGGACATTTACAGTGGAACACCAGATATAAAATTGCAATGGAATCCGCCAAGGGTCTCTGCTATCTTCACCATGATTGTTCGCCGTTGATAGTTCATCGAGACGTGAAATCAAATAACATCTTGTTAGACTCCAGTTTCGAAGCTCACGTTGCAGATTTCGGCCTCGCCAAGTTCTTGCAGGACTCGGGTACTTCCGAATGCATGTCCGCGATTGCCGGATCTTATGGGTACATCGCCCCAGAATATGCATACACTCTGAAGGTTGATGAGAAGAGCGACGTGTACAGTTTCGGTGTTGTCTTGTTAGAGCTCGTCAGTGGGAGAAAACCAGTCGGGGAATTCGGCGATGGCGTCGATATTGTCCAGTGGGTTCGAAAAATGACAGATTCAAACAAGGAAGCAGTCGTCAAAATCATCGACCAGAGACTATCCTCTGTTCCTCTCCACGAAATAATGCACGTCTTTTACGTCGCTTTGCTCTGCGTGGAAGAACAGGCAGTGGAGAGACCCACCATGCGGGAGGTCGTTCAGATCTTGACAGAGCTTCCTAAGCCTCCAAGCTCTAAACCTGGTGACAATGGTCCTGCAATGGCCGACTCCAGTTCGAACTCTCACCCTCCTCCCGATCTTCTAAGCATTTGA 2994 48.06 MKLLLLLLLLLLLLHLHFPPSLSARISEYRALLSLKTSIIGDPNSSLSSWKRSTDHCAWAGVSCDSRRRVVALDLSGLNLSGLLSPDIAHLPLLANLSLALNQFSGQLPPQISALSELRYLNLSNNYFNGTFPSELSELKNLQVLDFYNNNMTGDLPLAVTELPNLQHLHLGGNFFLGPIPAEYGRWEFLEYLAVSGNELEGPIPPEIGNLGKLRELYIGYYNSFGGSLPAEIGNLSSLVRFDAANCGLTGEIPPELGKLQNLDTLFLQVNALSGTFPSELGMLMKLKSMDLSNNMLTGEIPVSFSDLKSLTLLNLFRNRLHGAIPDFIGDLPELEVLQLWENNLTGWIPQGLGKNGKLQLLDLSSNKLTGTLPPDMCSSNRLHTLITLGNFLFGPIPESLGKCESLSRIRMGGNFLNGSIPIGLFNLPNLTQVELQNNFLIGEFPVTDSISVNLGQISLSSNQLSGSLPPSIGNFSGVQKLLLYGNNFSGPIPSEIGKLQQLSKIDFSHNQFSGSIAPEISQCKLLTFVDLSRNELSGQIPDEITSMRILNYLNLSRNHLVGNIPSSIASMQSLTSVDFSYNNLSGLVPGSGQFSYFNSTSFMGNPNLCGPYLGPCKNGIANSDGRPHEKPHLSASLKLLLVIGLLVCSIAFAIAAIMKARSLKRGTEARAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGTVYKGSMPNSEIVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGNKGGHLQWNTRYKIAMESAKGLCYLHHDCSPLIVHRDVKSNNILLDSSFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTDSNKEAVVKIIDQRLSSVPLHEIMHVFYVALLCVEEQAVERPTMREVVQILTELPKPPSSKPGDNGPAMADSSSNSHPPPDLLSI 997
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 401802 404863 - Bpe002329.3 Bpe10g00028 109150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00028 997 Gene3D Ribonuclease Inhibitor 25 221 IPR032675 -
Bpe10g00028 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Bpe10g00028 997 SUPERFAMILY L domain-like 359 617 - -
Bpe10g00028 997 Gene3D Transferase(Phosphotransferase) domain 1 770 975 - -
Bpe10g00028 997 SUPERFAMILY RNI-like 73 415 - -
Bpe10g00028 997 ProSiteProfiles Protein kinase domain profile. 692 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00028 997 SUPERFAMILY Protein kinase-like (PK-like) 686 963 IPR011009 -
Bpe10g00028 997 Gene3D Phosphorylase Kinase; domain 1 659 769 - -
Bpe10g00028 997 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Bpe10g00028 997 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 988 - -
Bpe10g00028 997 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 988 - -
Bpe10g00028 997 Gene3D Ribonuclease Inhibitor 222 345 IPR032675 -
Bpe10g00028 997 SMART serkin_6 692 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00028 997 MobiDBLite consensus disorder prediction 964 997 - -
Bpe10g00028 997 SMART LRR_typ_2 332 356 IPR003591 -
Bpe10g00028 997 SMART LRR_typ_2 163 187 IPR003591 -
Bpe10g00028 997 SMART LRR_typ_2 572 595 IPR003591 -
Bpe10g00028 997 SMART LRR_typ_2 500 524 IPR003591 -
Bpe10g00028 997 SMART LRR_typ_2 115 139 IPR003591 -
Bpe10g00028 997 SMART LRR_typ_2 357 380 IPR003591 -
Bpe10g00028 997 MobiDBLite consensus disorder prediction 978 997 - -
Bpe10g00028 997 Pfam Leucine rich repeat 262 321 IPR001611 GO:0005515
Bpe10g00028 997 Pfam Leucine rich repeat 117 174 IPR001611 GO:0005515
Bpe10g00028 997 Pfam Protein tyrosine and serine/threonine kinase 693 963 IPR001245 GO:0004672|GO:0006468
Bpe10g00028 997 Gene3D Ribonuclease Inhibitor 346 620 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00109 Bpe-Chr4:752715 Bpe10g00028 Bpe-Chr10:401802 1.26E-166 dispersed
Bpe04g00251 Bpe-Chr4:1680385 Bpe10g00028 Bpe-Chr10:401802 0 dispersed
Bpe06g00118 Bpe-Chr6:1906214 Bpe10g00028 Bpe-Chr10:401802 0 dispersed
Bpe10g00028 Bpe-Chr10:401802 Bpe13g00148 Bpe-Chr13:9178996 0 dispersed
Bpe10g00026 Bpe-Chr10:386710 Bpe10g00028 Bpe-Chr10:401802 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63516 PF07714 PK_Tyr_Ser-Thr 9.70E-48 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00028 - - jre:108997702 1583.93