Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00041 ATGCCACCAGTAGTATCTGCAGCAGGTAGCCACGAAGAGCCAGAGGAAGCTTACGGATGGGCTGCAAGAGATTTCTCCGGGATTCTTTCCCCTTTCCACTTCCAACGAAAGGCTAATGGCGTAGATGATATAACTATCAACATACTCTACTGTGGAATTTGTTACTCCGATCTTTTTTTTGCCAAAGATAAAGGAAAAATGACCCCCTATCCTTTTGTTCCTGGGCATGAAATAGTAGGAGAAGTGACAAAAGTAGGAAAGCAGGTGAGAAAATTTAGAGTGGGAGACAAAGCAGGGGTCGGATGCTTCGTCGGATCCTGCAGAAAATGCGAGAAATGCGCACACAATTTGGAAAATTACTGCCCCGAATCCATTTGGACATTGGTCGGAGTTGATAAAGACGGTCAGAAAAGCTATGGAGGATTCTCGGACAAGATTGTTGTCGACGAGTATTTTGCAGTGACAATTCCAGAGGGCGTTTATTTACCTGGAGCTGCTCCGTTGCTTTGCGCAGGAATCACAGTCTATAGCCCCATGAAATTTTACGAGCTGTGTGAACCTGGTCAGCATATTGGCGTGGTAGGGCTCGGAGGGCTTGGTCATTTGGCCGTTAAATTTGGGAAAGCTTTTGGCATGAAGGTCACTGTAATTAGTACTTCTCCCAACAAGAAGAAGGACGCCATGGAAATCCTCGGAGCTGATGCCTTTTTGGTTAGCCACGATCCGGAAGACATGCAAACCGCCGCAAGCTCAATGGATGGAATAATTGATACGGTTTCAGCCGCACACTCGATCTTGCCATTGCTTGATTTGATGAAACTGAACGGAAAATTGATTCTGCTCGGTGGAATAATCGAGCCTCTGGAAATCTCATGTCTACCTCTGATTCAAGGGAGGAAGATAATTGGTGGGAGTGCGGCCGGAGGACTGAAAGAAACGCAGGAGATGGTGGAATTCTCGGCTGAACATGGCATCAGCGCCGAGGTTGAAGTGATCACGCCGGAATATTTGAACACGGCGATGGAGCGTCTAGAGAAGGGCGACGTTAAATATCGATTTGTGCTGGATGTGGTTAACGCTCTGGAGCCCAAGTAA 1095 47.12 MPPVVSAAGSHEEPEEAYGWAARDFSGILSPFHFQRKANGVDDITINILYCGICYSDLFFAKDKGKMTPYPFVPGHEIVGEVTKVGKQVRKFRVGDKAGVGCFVGSCRKCEKCAHNLENYCPESIWTLVGVDKDGQKSYGGFSDKIVVDEYFAVTIPEGVYLPGAAPLLCAGITVYSPMKFYELCEPGQHIGVVGLGGLGHLAVKFGKAFGMKVTVISTSPNKKKDAMEILGADAFLVSHDPEDMQTAASSMDGIIDTVSAAHSILPLLDLMKLNGKLILLGGIIEPLEISCLPLIQGRKIIGGSAAGGLKETQEMVEFSAEHGISAEVEVITPEYLNTAMERLEKGDVKYRFVLDVVNALEPK 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 622569 623902 + Bpe002339.1 Bpe10g00041 109163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00041 364 Pfam Alcohol dehydrogenase GroES-like domain 42 154 IPR013154 -
Bpe10g00041 364 PANTHER ALDEHYDE REDUCTASE 8 362 - -
Bpe10g00041 364 PANTHER ALDEHYDE REDUCTASE 9 362 - -
Bpe10g00041 364 Gene3D - 171 327 - -
Bpe10g00041 364 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 75 89 IPR002328 GO:0008270|GO:0016491
Bpe10g00041 364 Gene3D - 20 357 - -
Bpe10g00041 364 PANTHER - 8 362 - -
Bpe10g00041 364 SUPERFAMILY GroES-like 16 203 IPR011032 -
Bpe10g00041 364 Pfam Zinc-binding dehydrogenase 198 321 IPR013149 -
Bpe10g00041 364 SMART PKS_ER_names_mod 27 355 IPR020843 GO:0016491
Bpe10g00041 364 PANTHER LOW QUALITY PROTEIN: 8-HYDROXYGERANIOL DEHYDROGENASE-LIKE 9 362 - -
Bpe10g00041 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 325 IPR036291 -
Bpe10g00041 364 CDD CAD1 19 356 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00041 Bpe-Chr10:622569 Bpe13g00009 Bpe-Chr13:254135 5.93E-145 dispersed
Bpe10g00041 Bpe-Chr10:622569 Bpe13g00157 Bpe-Chr13:9324133 4.42E-143 wgd
Bpe10g00041 Bpe-Chr10:622569 Bpe15g00268 Bpe-Chr15:14055802 2.42E-146 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00041 - K23232 qsu:112003912 466.077