Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00104 ATGGGAGGAGGTTCGTCGGGGAGGATGCCTACTTGGAGAGAGAGGGAAAATAACAAGAGGAGGGAAAGAAGAAGGAGAGCCATTGCTGCTAAGATTTATGCTGGCTTAAGAGCTCAGGGAAACTATAAGCTGCCTAAGCACTGTGATAATAACGAGGTCTTGAAAGCTCTCTGTGCTGAAGCTGGTTGGGTTGTGGAAGAAGATGGAACTACCTATAGAAAGGGTTGCAGGCCTCCAATGGCGGAAATTGCAGCAAATTTGGCAAACATGAGTGGCTGTTCATCTCTTCAACCGAGTCCTCAATCTTCCTCCTTCCCTAGCCCTGCACCATCCTACCCTGCAAGTCCTTCATCTTCTTCATTTCCAAGCCCAACCCCATTCGATCAAAATCCCTCCGCTTATCTCCTTCCATTTCTTCAAAACATAGCTTCAATTCCTACTAATCTCCCTCCTCTTAGAATATCAAACAGCGCCCCTGTAACTCCACCTCTTTCATCTCCAACCTCAAGAGGCTCCAAGCGAAAACCCGATTGGGAGTCCCTCGCTAATGGATCTTTATCCTCCTTTCGTCACCCCCTTTTTGCTGTCTCCGCTCCGGCCAGTCCCACAAGGCAGCATCATCTTCCTCCGGCGACGATTCCGGAGTGTGACGAGTCAGATGCATCCACAGTTGACTCGGGCAGGTGGGTCAGTTTTCAGACCACCGGACCGGCTGCTATTCCTACTTCGCCTACGTTCAATTTGATGAAGCCATTGATACAGAAGTGCTCTTTACAAGACACAGTGGAGGGACGAGGGCCAATGTGTTTGGATTTTGAATTCGAAAGTGGCAGAGTGAAGCCATGGCAGGGCGAGAGGATTCACGAGGTTGGCGTTGACGATTTAGAGCTTACCCTTGGAGGTGGCAAGACCCATGGTTAA 921 49.73 MGGGSSGRMPTWRERENNKRRERRRRAIAAKIYAGLRAQGNYKLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGCRPPMAEIAANLANMSGCSSLQPSPQSSSFPSPAPSYPASPSSSSFPSPTPFDQNPSAYLLPFLQNIASIPTNLPPLRISNSAPVTPPLSSPTSRGSKRKPDWESLANGSLSSFRHPLFAVSAPASPTRQHHLPPATIPECDESDASTVDSGRWVSFQTTGPAAIPTSPTFNLMKPLIQKCSLQDTVEGRGPMCLDFEFESGRVKPWQGERIHEVGVDDLELTLGGGKTHG 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1582635 1583879 + Bpe002404.1 Bpe10g00104 109226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00104 306 MobiDBLite consensus disorder prediction 1 24 - -
Bpe10g00104 306 MobiDBLite consensus disorder prediction 154 171 - -
Bpe10g00104 306 MobiDBLite consensus disorder prediction 154 180 - -
Bpe10g00104 306 MobiDBLite consensus disorder prediction 200 220 - -
Bpe10g00104 306 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 3 305 - -
Bpe10g00104 306 Pfam BES1/BZR1 plant transcription factor, N-terminal 5 130 IPR008540 -
Bpe10g00104 306 MobiDBLite consensus disorder prediction 103 120 - -
Bpe10g00104 306 MobiDBLite consensus disorder prediction 92 126 - -
Bpe10g00104 306 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 3 305 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00104 Bpe-Chr10:1582635 Bpe11g01121 Bpe-Chr11:8371659 1.32E-38 dispersed
Bpe10g00104 Bpe-Chr10:1582635 Bpe02g00402 Bpe-Chr2:2617186 2.15E-86 wgd
Bpe10g00104 Bpe-Chr10:1582635 Bpe04g00207 Bpe-Chr4:1420953 1.09E-96 wgd
Bpe10g00104 Bpe-Chr10:1582635 Bpe06g00056 Bpe-Chr6:673237 3.64E-154 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21912 PF05687 BES1_N 1.10E-62 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00104 K14503 - vvi:100249673 441.81