Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe10g00106 | GGACAGGGAAGACTAAAACGACGTCGTAAGAGGAGCAGACCAGAGAATGAGATTGCGGGGTTGAGAAAGAGAAAACTGAACGCAGAGCAACTGAGTCTTCTGGAAATGAACTTTGGAGATGAACACAAACTGGAATCTGAGAGAAAATATCGATTGGCTTCAGAACTGGGTCTTGATCCTCGTACAGTTTCCGTTTGGTTTCAGAACAGAAGGGCTCGTTGGAAGAGCAAGAAAATGGAGGAAGAATACTGTTCTTTGAAGAAAGCTCATGAGTCTGTTGTTGTACAGAAATCACAGCTTGAATCTGAGATAATGAAACTGAAGGAGCAGCTGTCGGAGGCTGAGATGGAGATCAAACGGCTGTCGAGCAACAGTCCAAGCTCGTCGTTGACTATGGGTGGCATGGATGAAGCACCATTTATCGGAGAATTCGGATATGTAGACGTATTCTACATGCAAGAAAATATTAATGTAATTAATGGAATGGAATGGGTTAATCTGTATAACTAA | 510 | 42.75 | GQGRLKRRRKRSRPENEIAGLRKRKLNAEQLSLLEMNFGDEHKLESERKYRLASELGLDPRTVSVWFQNRRARWKSKKMEEEYCSLKKAHESVVVQKSQLESEIMKLKEQLSEAEMEIKRLSSNSPSSSLTMGGMDEAPFIGEFGYVDVFYMQENINVINGMEWVNLYN | 169 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 1801236 | 1802266 | + | Bpe002407.1 | Bpe10g00106 | 109228 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe10g00106 | 169 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40-LIKE | 1 | 168 | - | - | |
Bpe10g00106 | 169 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN | 1 | 168 | IPR045224 | GO:0003700 | |
Bpe10g00106 | 169 | Pfam | Homeodomain | 24 | 75 | IPR001356 | GO:0003677 | |
Bpe10g00106 | 169 | ProSitePatterns | 'Homeobox' domain signature. | 52 | 75 | IPR017970 | GO:0000981|GO:0006355 | |
Bpe10g00106 | 169 | PRINTS | Lambda-repressor HTH signature | 57 | 73 | IPR000047 | GO:0003677 | |
Bpe10g00106 | 169 | PRINTS | Lambda-repressor HTH signature | 48 | 57 | IPR000047 | GO:0003677 | |
Bpe10g00106 | 169 | SUPERFAMILY | Homeodomain-like | 23 | 83 | IPR009057 | - | |
Bpe10g00106 | 169 | Gene3D | - | 17 | 86 | - | - | |
Bpe10g00106 | 169 | ProSiteProfiles | 'Homeobox' domain profile. | 22 | 77 | IPR001356 | GO:0003677 | |
Bpe10g00106 | 169 | SMART | HOX_1 | 20 | 81 | IPR001356 | GO:0003677 | |
Bpe10g00106 | 169 | CDD | homeodomain | 22 | 78 | IPR001356 | GO:0003677 | |
Bpe10g00106 | 169 | Coils | Coil | 90 | 124 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe10g00106 | Bpe13g00454 | CCT | |
Bpe06g00054 | Bpe10g00106 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe10g00106 | Bpe-Chr10:1801236 | Bpe03g01259 | Bpe-Chr3:31194409 | 3.85E-24 | dispersed | |
Bpe10g00106 | Bpe-Chr10:1801236 | Bpe13g00454 | Bpe-Chr13:12050748 | 2.97E-40 | wgd | |
Bpe10g00106 | Bpe-Chr10:1801236 | Bpe06g00054 | Bpe-Chr6:648161 | 2.62E-62 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21913 | PF00046 | Homeodomain | 6.90E-16 | CL0123 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe10g00106 | K09338 | - | egr:104419765 | 208.764 |