Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00107 ATGAGATTGTACGTTGATTATCGAGAATTTAATAGAGTTACCATAAAAAATAAGTACTCACTTTTACGAATTGATAACTTATTTGATCAATTAAAAGGGACAGTCCTTTTGTCAAAAATAAATCTCAAATTATCACTAGAAGTACCTACAACTCCATATCCTGACTGGTCAAGCTCAATGCAGGCCTATTATGGCGCTGGTGCTACTCCGCCATTTTTTGCATCAACTGTAGCTTCTCCCACCCCTCACCCCTATCTGTGGGGAAGTCAGCATCCTTTGATTCCACCATACGGGACTCCAGTACCATATCCGGCTATTTATCCTCCCGGGGGAATTTATGCTCATCCTAGTATGGCAATGACTCCTGGTACAGTTCACACAAATACAGAGCTGGAAGGAAAGTCTCCAGAGGGAAGAGATAGGGCTTCAGCCAAAAAAGTTAAGGGAAATGCAGGAAATGTTGGATCAGCTGGTGGCAAAGTGAGGGAGAGTGGCAAGGTAGCTTCAGGTTCAGGAAATGATGGTGCTTCTCAGAGTGCTGATAGCGGTACAGATGGTTCATCGGATGGTAGTGATGAGAATCCTAATCAACAGGAATATACTGCAAATAAGAAGGGTAGCTTTGACCAGATGCTCGCAGACGGTATAGGAGCAAATGCACAAAGTAGCGGCAAACCAGTTGGCTCTATATCTGCAACTAATCTAAATATTGGAATGGATTTATGGAATACATCATCTGGCTCTGCCTCTACAAAAGTTATATCAAACCCATCTGGTACCTCTGCCATTATTCCTGCTCCAATGATTGGACGTGAAGGCGTAATGCCTGACCAATGGATTCAAGATGAACGCGAACTAAAACGACAAAAGAGAAAGCAGTCAAATAGGGAGTCAGCCCGGAGATCAAGATTGCGTAAGCAGGCGGAGTGCGAAGAATTACAGGCTAGAGTGCAGACATTGAGCAATGAAAATAGGACTCTACGAGATGAACTGCAGAGACTTTCTGAAGAATGTGAGAAGCTCACGGCAGAAAACAGCAACATCAAGGAAGAACTAACTCGATTGTGTGGACCAGAGGCATTAGCAAACCTCGAACAAGGGGTAGATGAAGGCAATAGGTAA 1122 43.58 MRLYVDYREFNRVTIKNKYSLLRIDNLFDQLKGTVLLSKINLKLSLEVPTTPYPDWSSSMQAYYGAGATPPFFASTVASPTPHPYLWGSQHPLIPPYGTPVPYPAIYPPGGIYAHPSMAMTPGTVHTNTELEGKSPEGRDRASAKKVKGNAGNVGSAGGKVRESGKVASGSGNDGASQSADSGTDGSSDGSDENPNQQEYTANKKGSFDQMLADGIGANAQSSGKPVGSISATNLNIGMDLWNTSSGSASTKVISNPSGTSAIIPAPMIGREGVMPDQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQARVQTLSNENRTLRDELQRLSEECEKLTAENSNIKEELTRLCGPEALANLEQGVDEGNR 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1859362 1864057 + Bpe002409.1 Bpe10g00107 109229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00107 373 SUPERFAMILY DNA/RNA polymerases 2 43 IPR043502 -
Bpe10g00107 373 SUPERFAMILY Leucine zipper domain 286 342 IPR046347 GO:0003700|GO:0006355
Bpe10g00107 373 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 285 348 IPR004827 GO:0003700|GO:0006355
Bpe10g00107 373 Coils Coil 296 351 - -
Bpe10g00107 373 MobiDBLite consensus disorder prediction 287 306 - -
Bpe10g00107 373 MobiDBLite consensus disorder prediction 132 146 - -
Bpe10g00107 373 MobiDBLite consensus disorder prediction 170 200 - -
Bpe10g00107 373 CDD bZIP_plant_GBF1 288 338 IPR045314 GO:0003700|GO:0006355
Bpe10g00107 373 Gene3D - 286 340 - -
Bpe10g00107 373 PRINTS cAMP response element binding (CREB) protein signature 234 249 - -
Bpe10g00107 373 PRINTS cAMP response element binding (CREB) protein signature 300 320 - -
Bpe10g00107 373 PRINTS cAMP response element binding (CREB) protein signature 320 337 - -
Bpe10g00107 373 PRINTS cAMP response element binding (CREB) protein signature 282 298 - -
Bpe10g00107 373 SMART brlzneu 283 347 IPR004827 GO:0003700|GO:0006355
Bpe10g00107 373 Gene3D - 1 89 IPR043128 -
Bpe10g00107 373 Pfam bZIP transcription factor 283 345 IPR004827 GO:0003700|GO:0006355
Bpe10g00107 373 PANTHER G-BOX-BINDING FACTOR 1 43 367 - -
Bpe10g00107 373 Pfam G-box binding protein MFMR 49 118 IPR012900 -
Bpe10g00107 373 MobiDBLite consensus disorder prediction 119 200 - -
Bpe10g00107 373 PANTHER G-BOX-BINDING FACTOR 3-RELATED 43 367 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bpe10g00107 373 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 290 305 IPR004827 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe06g00053 Bpe10g00107 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00934 Bpe-Chr4:6265497 Bpe10g00107 Bpe-Chr10:1859362 5.68E-42 dispersed
Bpe10g00107 Bpe-Chr10:1859362 Bpe13g00969 Bpe-Chr13:15522413 1.07E-47 dispersed
Bpe01g00816 Bpe-Chr1:10552512 Bpe10g00107 Bpe-Chr10:1859362 9.00E-12 transposed
Bpe11g00296 Bpe-Chr11:2164892 Bpe10g00107 Bpe-Chr10:1859362 1.04E-60 transposed
Bpe10g00107 Bpe-Chr10:1859362 Bpe06g00053 Bpe-Chr6:631164 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21914 PF07777 MFMR 3.60E-27 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00107 K09060 - qsu:112016189 466.848