Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe10g00110 | ATGCCGACTGAGTTAGACCATTCCTCCACTGCTTCAGGCGAAGCTAGTGTTTCCTCCTCTGGAAATCAACCGCCACCTCCAAAATCAACAGCTAAGAAAAAGCGAAACTTACCTGGAATGCCAGATCCAGAAGCAGAGGTGATTGCTCTGTCTCCGAAGACTCTCATGGCGACGAATCGATTCGTTTGTGAAATTTGCAACAAGGGTTTTCAAAGGGATCAGAATTTGCAACTGCATCGAAGAGGTCATAATCTACCATGGAAGTTGAAGCAGCGATCGAGTAAGGAGGTAAAGAAGAGAGTGTATGTCTGCCCGGAGCCGTCGTGTGTCCACCACGATCCATCAAGAGCTCTGGGCGATCTCACCGGAATAAAGAAGCATTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAATGCGACAAGTGTTCAAAGAAATACGCAGTTCAGTCGGACTGGAAAGCTCATTCCAAAATCTGCGGCACCAGAGAATACAAGTGCGATTGCGGAACGTTGTTTTCCAGGAGGGATAGCTTCATCACCCACAGAGCTTTCTGCGATGCGTTGGCCGAGGAGAGCGCCAGAGCTCCGACTCATCCTCAACCCCCAACAATGGCGAATCCAAATTCCGAGTCCGACCCAAAAGTTCCACCAACCCCATCTTCTTCAGCTCCCGCGCCGCCTGCGCCTCCGCTGTCTAGCGGGGCTGCAGTCTCCTCAGTTTTGCCGATTCAAAGTCAAGAGCTGCAAGAAAATCCCCCGCAAATTATCGAAGATGTAGCGGCAGGTGGAGCGGGATTAAATGGGAGCTGCAGCAGCAGTTCGAGCCCAAGCAGCCATAGCTGCTCAAGCAGTAGTGTATTTGCGAGCTTGTTTGCTTCGTCAAATGCAGCAGTGAGCTTACCACCTCCTCAACCTCCTGCATTTACTGACCTCATAAGAGCCATGGGAAGGCCTGATCGGCCGGCAGAACTCGCTCTATCTTCACCCACCGAACCCATTTCTCTCTGCCTCTCAACTAGCCATCACGGGGCATCAATTTTTGGGGCTGTAGGCCAATATCCACCTCCACCTCCACAGCCAGCTATGTCAGCCACAGCCCTTCTTCAGAAAGCAGCTCAAATGGGGGCTGCAGCCACTAATGCATCATTTCTTCGAGGGTTTGGAGTAGTGGCCTCAACTTCGACCTCTACACAGCACCAATGGAGTCAGAGGCAAGTCGACCCGGATTCCGCCTCAATAGCTGCAGGGCTCGGCCTGGGACTTCCTTATGATGGAAGTTCTGGATTGAAGGAACTGATGATGGGAAATCATTCCATTTTTGGTCCTAAGCAAACTACTCTTGATTTTCTAGGTCTCGGAATGGCAGCTGGTGGAAGCCCAAGTGGCAGCCTATCGGCGCTAATCACATCCATTGGTGGCGGTCTAGATGTCACAGCGGCAGCCTCCTTTGGAGGTGGTGAATTCTCGGGCAAAGACATTAGTAGAAACTCTTGA | 1494 | 51.41 | MPTELDHSSTASGEASVSSSGNQPPPPKSTAKKKRNLPGMPDPEAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSSKEVKKRVYVCPEPSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARAPTHPQPPTMANPNSESDPKVPPTPSSSAPAPPAPPLSSGAAVSSVLPIQSQELQENPPQIIEDVAAGGAGLNGSCSSSSSPSSHSCSSSSVFASLFASSNAAVSLPPPQPPAFTDLIRAMGRPDRPAELALSSPTEPISLCLSTSHHGASIFGAVGQYPPPPPQPAMSATALLQKAAQMGAAATNASFLRGFGVVASTSTSTQHQWSQRQVDPDSASIAAGLGLGLPYDGSSGLKELMMGNHSIFGPKQTTLDFLGLGMAAGGSPSGSLSALITSIGGGLDVTAAASFGGGEFSGKDISRNS | 497 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 1913481 | 1915587 | - | Bpe002412.1 | Bpe10g00110 | 109232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe10g00110 | 497 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 8 | 497 | - | - | |
| Bpe10g00110 | 497 | MobiDBLite | consensus disorder prediction | 192 | 237 | - | - | |
| Bpe10g00110 | 497 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 61 | 83 | IPR013087 | - | |
| Bpe10g00110 | 497 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 63 | 83 | IPR013087 | - | |
| Bpe10g00110 | 497 | Gene3D | Classic Zinc Finger | 40 | 107 | - | - | |
| Bpe10g00110 | 497 | PANTHER | PROTEIN INDETERMINATE-DOMAIN 2-LIKE | 8 | 497 | - | - | |
| Bpe10g00110 | 497 | SUPERFAMILY | beta-beta-alpha zinc fingers | 60 | 157 | IPR036236 | - | |
| Bpe10g00110 | 497 | SMART | c2h2final6 | 61 | 83 | IPR013087 | - | |
| Bpe10g00110 | 497 | SMART | c2h2final6 | 102 | 132 | IPR013087 | - | |
| Bpe10g00110 | 497 | SMART | c2h2final6 | 137 | 157 | IPR013087 | - | |
| Bpe10g00110 | 497 | MobiDBLite | consensus disorder prediction | 212 | 231 | - | - | |
| Bpe10g00110 | 497 | Gene3D | Classic Zinc Finger | 115 | 194 | - | - | |
| Bpe10g00110 | 497 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
| Bpe10g00110 | 497 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Bpe10g00110 | 497 | Pfam | Zinc finger, C2H2 type | 61 | 83 | IPR013087 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bpe06g00051 | Bpe10g00110 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe06g00780 | Bpe-Chr6:18046584 | Bpe10g00110 | Bpe-Chr10:1913481 | 9.74E-118 | dispersed | |
| Bpe09g00021 | Bpe-Chr9:171971 | Bpe10g00110 | Bpe-Chr10:1913481 | 9.20E-116 | dispersed | |
| Bpe10g00110 | Bpe-Chr10:1913481 | Bpe10g00383 | Bpe-Chr10:11416587 | 1.44E-112 | dispersed | |
| Bpe14g00716 | Bpe-Chr14:5582484 | Bpe10g00110 | Bpe-Chr10:1913481 | 4.33E-97 | dispersed | |
| Bpe10g00110 | Bpe-Chr10:1913481 | Bpe04g00209 | Bpe-Chr4:1434848 | 3.45E-144 | wgd | |
| Bpe10g00110 | Bpe-Chr10:1913481 | Bpe06g00051 | Bpe-Chr6:611594 | 0 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 21915 | PF00096 | zf-C2H2 | 0.005 | CL0361 | Bpe | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe10g00110 | K25869 | - | tcc:18610967 | 717.227 |