Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00111 ATGCTTATAATCTGCATAATGTGTTCGAGGAAAAAAAGAAAGCCAGATAAAATGCAATATTACAGAGACTCCGGCGAAGGTGGCAAGAATGGCGATTATTACAACAATTCAATGCAACAAAACTGGCACGGAAGCGACCATTTCGCGAGGCTTACGTCACCGCCTGGTGCGAGCGGGTCATTGGGAGGCCCGTGGCCGGCACCTCCCCCACCTCCGCCGATGGGTTTTAGCGGCGAAACCAGCTCAAATTACTCAGGCCCAAGGCAAATGCCTCTCCCGCCACCGTCTCCGAACCTCTCGCTAGGGTTCAACAAGAGCACGTTCACCTACGACGAGCTGGCGGCGGCGACCGGTGGATTTGCGCCGGTGAATCTGCTTGGGCAAGGTGGATTTGGGTTTGTTCATAAGGGTGTTCTTCCCAATGGGAAAGAAATCGCTGTGAAGAGTCTGAAATCTGGGAGTGGACAAGGGGAGAGAGAATTTCAGGCGGAAGTTGAAATCATTAGCAGAGTTCATCATCGTCATCTTGTTTCTCTTGTTGGGTATTGCATTGCCGGTGGACAGCGGATGCTGGTTTACGAATTTGTGCCCAACAAGACCTTGGAACATCACCTCCATGCAAAGAATCTTGCCACCATGGACCTGCCTGCCAGGCTTCGTGTTGCCATTGGATCTGCCAAAGGGCTTGCCTATCTTCACGAAGACTGCCATCCTCGGATTATACATCGTGACATAAAATCTGCAAATATTCTCCTCGACTACAACTTTGAAGCCATGGTGGCAGATTTCGGATTGGCTAAGCTTTCTTCCGATAATTACACTCATGTCTCTACAAGAATCATGGGCACATTCGGGTATCTGGCTCCGGAATATGCATCCAGTGGGAAATTGACAGAGAAATCTGATGTTTTCTCATTTGGGGTCATGCTGTTGGAGCTCATAACTGGAAAAAGACCAGTAGATCCAACTAATGCAATGGAGGATAGCTTAGTTGACTGGGCTCGACCCCTTTTGAGCCGGGCACTCGAGGAAGGGAACTTTGCCGAGCTGGTTGATATTCGCTTAGAAAATAACTTTAACCCTCAAGAGATGGCTAGAATGGTTGCTTGTGCTGCAGCTAGCATTCGCCATTCGGCCCGAAAGCGCCCACGAATGAGCCAGATAGTAAGAGCATTAGAAGGAGATGTGTCATTGGACGACTTGAAAGACGGGGGTGGGAGGCTAGGAGAGAGCTCGACGTTCACCTCAAACATAAGCACATCGGAGTACGACACAAGGGCGTATAACACAGACATGGCAAAGTTTAGGCAGATGGCGCTATCAAGCCAGGAGTTTGGGAGCAGTGAGCATGGGACTTCCAGCAGTGACTCAGGCAACCAAAAACAGTACTATTGA 1395 49.61 MLIICIMCSRKKRKPDKMQYYRDSGEGGKNGDYYNNSMQQNWHGSDHFARLTSPPGASGSLGGPWPAPPPPPPMGFSGETSSNYSGPRQMPLPPPSPNLSLGFNKSTFTYDELAAATGGFAPVNLLGQGGFGFVHKGVLPNGKEIAVKSLKSGSGQGEREFQAEVEIISRVHHRHLVSLVGYCIAGGQRMLVYEFVPNKTLEHHLHAKNLATMDLPARLRVAIGSAKGLAYLHEDCHPRIIHRDIKSANILLDYNFEAMVADFGLAKLSSDNYTHVSTRIMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDPTNAMEDSLVDWARPLLSRALEEGNFAELVDIRLENNFNPQEMARMVACAAASIRHSARKRPRMSQIVRALEGDVSLDDLKDGGGRLGESSTFTSNISTSEYDTRAYNTDMAKFRQMALSSQEFGSSEHGTSSSDSGNQKQYY 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1939705 1941920 - Bpe002413.1 Bpe10g00111 109233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00111 464 ProSiteProfiles Protein kinase domain profile. 120 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00111 464 ProSitePatterns Protein kinases ATP-binding region signature. 126 148 IPR017441 GO:0005524
Bpe10g00111 464 PANTHER BNACNNG49640D PROTEIN 1 452 - -
Bpe10g00111 464 Gene3D Transferase(Phosphotransferase) domain 1 196 402 - -
Bpe10g00111 464 Pfam Protein tyrosine and serine/threonine kinase 125 392 IPR001245 GO:0004672|GO:0006468
Bpe10g00111 464 SMART serkin_6 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00111 464 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 452 - -
Bpe10g00111 464 MobiDBLite consensus disorder prediction 441 464 - -
Bpe10g00111 464 Gene3D Phosphorylase Kinase; domain 1 97 195 - -
Bpe10g00111 464 CDD STKc_IRAK 126 394 - -
Bpe10g00111 464 SUPERFAMILY Protein kinase-like (PK-like) 94 392 IPR011009 -
Bpe10g00111 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Bpe10g00111 464 MobiDBLite consensus disorder prediction 61 76 - -
Bpe10g00111 464 MobiDBLite consensus disorder prediction 45 96 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00345 Bpe-Chr5:17406581 Bpe10g00111 Bpe-Chr10:1939705 0 dispersed
Bpe10g00111 Bpe-Chr10:1939705 Bpe10g00839 Bpe-Chr10:14356868 1.53E-153 dispersed
Bpe10g00111 Bpe-Chr10:1939705 Bpe13g01312 Bpe-Chr13:18259946 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63518 PF07714 PK_Tyr_Ser-Thr 3.00E-46 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00111 - - rcu:8273399 672.544