Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00145 TTGTTGTCCATGTTGAGGTTGATGGCTTTTCTTCTGCTTTTCGGGGTGCTATGCGCTCCCATTTTTGTTTTGGCCGACCAGAGTTTTGAGGCCCAAACGGAGATTGAGGCGCTTATGGCGTTTAAATTGAATCTTTACGATCCCCTAGGTGCTCTGACTGGGTGGGATCCGACGTCTCCGGTCGCGCCCTGCGACTGGCATGGGATTTTTTGCGCTGGAAGCCGAGTTACTGAGGTCCGTTTGCCTCGGTTACAACTGGAGGGCCGAGTTAGCGACGAGCTCGGTAATCTTAGGATGTTGCAAAACCTTAGTCTTCGTTCCAACTCCTTTAACGGCTCCATTCCGTCTTCTCTCTCTAAATGCACGTTGTTGCAGGCGGTGTTCTTGCAGTACAACTCGTTTTCCGGTATTCTGCCGTCGCAGATCCGAAACCTTACCGGTCTTGAAATCTTCAATGTGGCGCAGAACCATCTTTCCGGAGGGATTCCAAAAGACCTCCCTCGGACTCTCAAGTACATAGATCTTTCATCGAATATGTTCTCCGGTGAGATTCCGAGAAGTATTGCTAACTTAACTCAGCTTCAGCTCATTAACTTCTCTTTTAACCAGTTTAGCGGACAGATTCCGGCAAGCCTAGGTTGGCTTCAAAAGCTTCAATATCTTTGGCTGGATGGTAACATTTTCAAAGGTACTCTACCTTCTGCAATTGCCAATTGTTCGTCGCTCGTTCATTTGAGCGTTGATGGCAATGGACTCGAAGGTGTGATTCCGGCAGCCATTGGAGCTCTTCCCAGTCTTCAAGTTCTGTCTCTTTCGCAGAATAGGTTATCTGGACGTATCCCATTCTCTATTTTCTGCAATGTCTCGGTACATCCGCCATCACTCCGCATCGTTCAGCTTGGGTTTAATGGGTTTACGAAGATTGATGAGCCGGAGATAGCACTGTGTGATAGTGTTCTGCGGGTTCTTTATCTTCAACATAATCAATTACGAGGGCCCTTCCCATCGTCTTTAACACGTATATCAACTTTAACTCATCTAGACGTTTCGGATAATTTCTTCTCTGGAACTGTTCCACCCGAAACTGGGAACTTCTTGAGATTGGTGGAGCTAAAAATGGCGAATAATTCATTCGAAGGAGGGATTCCAGAAGAAATAAAAAAATGTAGCTCTCTGACTGTTCTTGATTTTGAAGGAAATCGCTTTGCTGGAGAGATTCCGGCGTTCTTTGGGGAAATGAGAGGCTTAAATGTGCTGATTCTGGGGAGAAACCAGTTTGTGGGAGCCGTTCCAGAAAGCTTTCGCAATCTCTCGGCGCTTAAAAGTTTGGATTTAGGAGGAAATAGTTTGAGTGGGTGCTTTCCTCAGGTTTTAATGGGGTTGAAAAATCTGACCTTTATCGATCTCAGCCGGAACAATTTGAGCTGTGAAATTCCTACAGGCATTGGGAATCTAACTAGGCTGGTAAATCTGAATCTAAGTGCAAATGGCTTTTCCGGGCAGATTCCGGCCAGCTTGGGAAACCTTTTATTGTTAACTACTCTTGATTTGAGCAGACAGAAATTTTCGGGTAAGTTGCCATTCGAGCTTTTCGGGCTGCCAAATGCGCAGGTAATAGCTCTCCAGGAGAACATGTTATCTGGCGATGTTTCTGAAGGATTCAGTAGTTTGATGAGTCTGCGCAGTTTGAATCTCAGTTCAAATCACTTTTCTGGTCCTATTCCCGCTTATTATGGGTTTCTCCCATCCCTGACTGTTCTCTCGTTGTCCGGCAATCACATATCTGGGACGATTCCACCGGAGCTAGGCAACTGCTCAAGCCTCCAAGTTTTTGAGGCTCGATTCAACTCGTTGACCGGAAACATACCGGAGAATCTCTCGCAGCTATCTCAATTAAAGGAGCTTGATTTGGGTCATAATAATTTGACAGGGGAAATTCCAGAGGAAATTTCCAGGTGCTTGTCATTAAACACTCTGCTGCTGGACTCAAATGATCTATCAGGTACCATACCAAGCTCTTTGTCCAAGCTTTCAAACCTCACAACGTTAGACCTCTCTTTTAACAATTTAAGTGGAGAAATTCCAGCTAGTATTAGCATCATTAGTGGATTGGTGAACTTTAATGTCGCAAATAATGATCTTGAAGGTGAGATTCCCGCGCCTTTAGGTTCTCGATTTGACAATTCATTATTATTTGCGGGAAATTCAAAGTTATGCGGGAAGCCGTTGGACCAAAAATGTGATAAAAAGGATAGAAGAAAGAAGCTCATTCTGTTAATTGCAGTGGCTGCTAGTGGAGCTATCCTACTGTCAGTGTGCTGTTGCTTTTACATTTTTAGTCTCTTTATTTGGTGGAAGAGACTGAAGGAGGGGGTGTATGGGGAGAAGAAGAGGAGCCCTGGAAGGACCAGCATCGGAGCTAGTAGCGGGCGTGGAAGCACCGATAGTGATGGACCGAAAGTTCTCATGTTCGTTAACAAAATCACGCTCGCAGACACAATTGAAGCAACTCGGCATTTCGATGAAGAGAATGTTCTTAGTAGAACTCGATATGGGCTGGTTTTCAAAGCTAGCTACAACGATGGAATGGTGCTCTCGATTCGCCGCCTCCCAAATGGGTCTCTGAGCGAAAATGTGATCAGAAAAGAAGCCGAATTATTGGGTAAAGTGAAGCATCGAAATCTAACTGTTCTTCGCGGATACTATGCAGGGCCGGATTTGAAACTTCTTGTATATGACTACATGCCGAATGGAAATCTTGCAACTCTTCTTCAAGAAGCCTCCCACCAAGATGGTCATGTTCTGAATTGGCCAATGCGACACCTTATCGCCCTCGGAATTGCTCGTGGTCTGGCTTTCCTCCACTCGTCCTCCATTGTCCACGGCGATGTTAAGCCACAAAATGTTCTGTTCGATGCTGATTTCGAAGCCCATTTGTCTGATTTTGGGCTAGATAGGCTTATGGTTGCAGCTCCGGCCGAAGCATCTTCCTCCACCTCGGTTGGCACATTGGGCTATGTTTCTCCTGAATTAGCTCTTACAGGGGAACCCACAAAGGAATCAGATGTCTACAGTTTTGGAATCGTCTTGCTTGAGCTGTTGACAGGGAAAAGACCAGTGATGTTTGGAGAAGATGAAGATATCGTGAAGTGGGTGAAGAAACAACTGCAAAGTGGTCAGATCAATGAGCTTTTGGAGCCGGGGTTGCTTGAGCTAGACCCTGAATCATCAGAGTGGGAGGAGTTTTTGCTAGGCGTTAAAGTTGGGTTGCTTTGTACTGCACCAGAGCCTCTTGATCGGCCAACCATGACCGATATAGTTTTCATGCTGGAAGGTTGCCGTGTCGGACCTGAAATTCCATCCTCGGCCGATCCAACCAATCAACCTTCTCCAACATGA 3399 45.78 LLSMLRLMAFLLLFGVLCAPIFVLADQSFEAQTEIEALMAFKLNLYDPLGALTGWDPTSPVAPCDWHGIFCAGSRVTEVRLPRLQLEGRVSDELGNLRMLQNLSLRSNSFNGSIPSSLSKCTLLQAVFLQYNSFSGILPSQIRNLTGLEIFNVAQNHLSGGIPKDLPRTLKYIDLSSNMFSGEIPRSIANLTQLQLINFSFNQFSGQIPASLGWLQKLQYLWLDGNIFKGTLPSAIANCSSLVHLSVDGNGLEGVIPAAIGALPSLQVLSLSQNRLSGRIPFSIFCNVSVHPPSLRIVQLGFNGFTKIDEPEIALCDSVLRVLYLQHNQLRGPFPSSLTRISTLTHLDVSDNFFSGTVPPETGNFLRLVELKMANNSFEGGIPEEIKKCSSLTVLDFEGNRFAGEIPAFFGEMRGLNVLILGRNQFVGAVPESFRNLSALKSLDLGGNSLSGCFPQVLMGLKNLTFIDLSRNNLSCEIPTGIGNLTRLVNLNLSANGFSGQIPASLGNLLLLTTLDLSRQKFSGKLPFELFGLPNAQVIALQENMLSGDVSEGFSSLMSLRSLNLSSNHFSGPIPAYYGFLPSLTVLSLSGNHISGTIPPELGNCSSLQVFEARFNSLTGNIPENLSQLSQLKELDLGHNNLTGEIPEEISRCLSLNTLLLDSNDLSGTIPSSLSKLSNLTTLDLSFNNLSGEIPASISIISGLVNFNVANNDLEGEIPAPLGSRFDNSLLFAGNSKLCGKPLDQKCDKKDRRKKLILLIAVAASGAILLSVCCCFYIFSLFIWWKRLKEGVYGEKKRSPGRTSIGASSGRGSTDSDGPKVLMFVNKITLADTIEATRHFDEENVLSRTRYGLVFKASYNDGMVLSIRRLPNGSLSENVIRKEAELLGKVKHRNLTVLRGYYAGPDLKLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHSSSIVHGDVKPQNVLFDADFEAHLSDFGLDRLMVAAPAEASSSTSVGTLGYVSPELALTGEPTKESDVYSFGIVLLELLTGKRPVMFGEDEDIVKWVKKQLQSGQINELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPEPLDRPTMTDIVFMLEGCRVGPEIPSSADPTNQPSPT 1132
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 3165222 3168620 + Bpe002452.1 Bpe10g00145 109267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00145 1132 Gene3D Phosphorylase Kinase; domain 1 813 914 - -
Bpe10g00145 1132 SMART serkin_6 840 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00145 1132 Pfam Leucine Rich repeat 677 693 IPR001611 GO:0005515
Bpe10g00145 1132 ProSitePatterns Serine/Threonine protein kinases active-site signature. 959 971 IPR008271 GO:0004672|GO:0006468
Bpe10g00145 1132 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 1128 - -
Bpe10g00145 1132 Gene3D Ribonuclease Inhibitor 480 756 IPR032675 -
Bpe10g00145 1132 SUPERFAMILY L domain-like 284 550 - -
Bpe10g00145 1132 SMART LRR_typ_2 97 121 IPR003591 -
Bpe10g00145 1132 SMART LRR_typ_2 437 460 IPR003591 -
Bpe10g00145 1132 SMART LRR_typ_2 677 701 IPR003591 -
Bpe10g00145 1132 SMART LRR_typ_2 413 436 IPR003591 -
Bpe10g00145 1132 SMART LRR_typ_2 191 215 IPR003591 -
Bpe10g00145 1132 SMART LRR_typ_2 629 653 IPR003591 -
Bpe10g00145 1132 SMART LRR_typ_2 263 287 IPR003591 -
Bpe10g00145 1132 SMART LRR_typ_2 461 485 IPR003591 -
Bpe10g00145 1132 SMART LRR_typ_2 581 605 IPR003591 -
Bpe10g00145 1132 Pfam Leucine rich repeat 414 474 IPR001611 GO:0005515
Bpe10g00145 1132 Pfam Leucine rich repeat 217 276 IPR001611 GO:0005515
Bpe10g00145 1132 Pfam Leucine Rich Repeat 170 191 IPR001611 GO:0005515
Bpe10g00145 1132 Pfam Leucine Rich Repeat 631 653 IPR001611 GO:0005515
Bpe10g00145 1132 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Bpe10g00145 1132 SUPERFAMILY L domain-like 461 723 - -
Bpe10g00145 1132 PRINTS Leucine-rich repeat signature 677 690 - -
Bpe10g00145 1132 PRINTS Leucine-rich repeat signature 632 645 - -
Bpe10g00145 1132 ProSiteProfiles Protein kinase domain profile. 840 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00145 1132 SUPERFAMILY Protein kinase-like (PK-like) 820 1120 IPR011009 -
Bpe10g00145 1132 ProSiteProfiles Leucine-rich repeat profile. 631 653 IPR001611 GO:0005515
Bpe10g00145 1132 SUPERFAMILY L domain-like 33 309 - -
Bpe10g00145 1132 Gene3D Ribonuclease Inhibitor 185 288 IPR032675 -
Bpe10g00145 1132 Gene3D Ribonuclease Inhibitor 31 184 IPR032675 -
Bpe10g00145 1132 MobiDBLite consensus disorder prediction 796 815 - -
Bpe10g00145 1132 Gene3D Ribonuclease Inhibitor 289 479 IPR032675 -
Bpe10g00145 1132 SMART LRR_sd22_2 167 193 - -
Bpe10g00145 1132 SMART LRR_sd22_2 629 652 - -
Bpe10g00145 1132 SMART LRR_sd22_2 677 706 - -
Bpe10g00145 1132 SMART LRR_sd22_2 437 463 - -
Bpe10g00145 1132 SMART LRR_sd22_2 263 290 - -
Bpe10g00145 1132 Pfam Protein kinase domain 850 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00145 1132 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 8 1128 - -
Bpe10g00145 1132 Gene3D Transferase(Phosphotransferase) domain 1 915 1119 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00145 Bpe-Chr10:3165222 Bpe13g00534 Bpe-Chr13:12615834 5.06E-157 dispersed
Bpe02g01407 Bpe-Chr2:17581343 Bpe10g00145 Bpe-Chr10:3165222 4.66E-20 transposed
Bpe08g01164 Bpe-Chr8:13399641 Bpe10g00145 Bpe-Chr10:3165222 5.49E-47 transposed
Bpe15g00465 Bpe-Chr15:16030371 Bpe10g00145 Bpe-Chr10:3165222 0 transposed
Bpe10g00145 Bpe-Chr10:3165222 Bpe02g01719 Bpe-Chr2:19667228 0 wgd
Bpe10g00145 Bpe-Chr10:3165222 Bpe06g00026 Bpe-Chr6:295037 7.38E-12 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63519 PF00069 Pkinase 7.60E-35 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00145 - - qsu:111996684 1560.04